Gene Information

Name : FSU_2076 (FSU_2076)
Accession : YP_005821984.1
Strain : Fibrobacter succinogenes S85
Genome accession: NC_017448
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2388034 - 2388813 bp
Length : 780 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGCAAACAGTCAAACCGATACTTTCTGTCCAAAATTTACGTCGCGATTTCAAGATGGGCGACGAAATTGTACATGCCCT
CCGTGGCGTGAGCTTTGATATTTACCCTGGCGAATTCGTGACCATTATGGGTACATCCGGTTCCGGCAAGTCTACCATGC
TGAACATTCTAGGGTGCATGGATCGACCGACTTCAGGACACTATATATTAGATGGACAACATACCGAGACATTGAAGCGC
GACGCGCTCGCCCGCATCCGGAGCCAGAAGCTCGGGTTCGTTTTCCAGAGCTACAACCTGCTCAGCCGCACGACCGCCAT
CGAAAACGTAGAACTCCCCCTATTATATAATTCAAAGATTTCCGCCGAGGAACGCCGCCACCGCGCTATCGAAGCGTTAA
AGATGGTTGGGCTTGAAAGCCGCATGAATCACTTGCCAAACCAGCTCTCGGGTGGCCAGCAGCAGCGCGTGGCTATTGCA
CGCGCCCTTGTGAACGACCCCGTCATCATTCTTGCAGACGAAGCGACCGGCAACCTCGACACCCGCACGAGCTACGAAAT
CATGATGATATTCCAGGAACTACACAGCCAGGGAAAAACCATCGCCTTCGTGACGCACGAACCAGACATCGCCACCTTCA
GCGGACGCACTATCACCCTCCGAGACGGACTCCTGAAAAAAGATGTCATCAACGAAAACGTGCAGAACGCCAAAGTCGCA
TTCGAAATGCTCCCGCCCCCAGAAACCTTTGAAGACGACGATGAAGGAGAAGTGGAATGA

Protein sequence :
MQTVKPILSVQNLRRDFKMGDEIVHALRGVSFDIYPGEFVTIMGTSGSGKSTMLNILGCMDRPTSGHYILDGQHTETLKR
DALARIRSQKLGFVFQSYNLLSRTTAIENVELPLLYNSKISAEERRHRAIEALKMVGLESRMNHLPNQLSGGQQQRVAIA
RALVNDPVIILADEATGNLDTRTSYEIMMIFQELHSQGKTIAFVTHEPDIATFSGRTITLRDGLLKKDVINENVQNAKVA
FEMLPPPETFEDDDEGEVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FSU_2076 YP_005821984.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-55 51
FSU_2076 YP_005821984.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-46 48
FSU_2076 YP_005821984.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-36 42
FSU_2076 YP_005821984.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-36 42
FSU_2076 YP_005821984.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-33 42