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Name : FSU_0179 (FSU_0179) Accession : YP_005820338.1 Strain : Fibrobacter succinogenes S85 Genome accession: NC_017448 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Function : - COG functional category : - COG ID : - EC number : - Position : 200841 - 202463 bp Length : 1623 bp Strand : + Note : identified by similarity to SP:P39853; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 DNA sequence : TTGGTGCTTACAACAAGCTTTGGCGTGTGCCTTTTCCGTTACATGTTCCGAAATGCTTTTATTTCGATTATAAATACGGG ACACCGTGAAGCTATGAAGAAGCGCACTATGATTATTGGTGCGGGTAATGCGACCAAACTTTTGCTTGATGAAATCAGGA ACAGCGCCAAGGATGCCGAAAAAGGTGTTGCTACATCGAATGCATCGAAGATTAATCCTGTTTGCCTGATTGATGATGAC CGCTATAAAATCGGCAAGCCGTTTGAAGGTGTGCTCGTTGCTGGTACGACAAGCGACATTCCTAAAATTGCAAAGCAGGA AAATATTGAACAGATTCTTTTCTCTATCCCGAGCTGCCCGCCGAAAGACCGCCAAGTGATTATGGACTTGTGTGGCAAGA CCGGACTTCCGGTGAAGGTCCTTCCTTTTGTGGGTACCCTTTTGGACACATCCAATGTTGGAACTGGGGAAACCAATTTT GCAACGCAAATTCGCGATATCAAGGTTGAAGACCTGCTGGGACGTGATCCAATCAAGTTTGATAACAAGGACATCCGAGC CTACATTGAAAACAAGGTCTGTATGGTGACTGGCGGTGGTGGTAGTATCGGTAGTGAACTTGTTCGTCAAATTGCAAAGT ATAATCCCAAACAAATTATCATCGTCGATATTTACGAAAATAACGCTTACGATATCCAGCAAGAACTGGTTATGGAATAC GGAAAGTCCCTGAATCTCGTGACGCTTATTGCAAGCGTTCGTGATTACTTCCGCATGAACCAGATTTTCAAGACCTACCA ACCGGAAGTGATTTTCCATGCCGCTGCCCATAAGCATGTGCCACTAATGGAAAACAATCCGATGGAAGCAATTAAGAACA ACGTTATCGGTACGTTCAACGTGGCTACGCTTGCCATGTTCAATAATGTCAAAAAGTTTGTGATGATCAGTACTGACAAG GCGGTGAACCCGACTAACGTTATGGGTGCATCTAAACGTTGCTGCGAAATGATTGTTCGCTTCATGTCCATGCAAAAGGA AAGTAACACGGAATTCGTCGTGACTCGCTTTGGCAATGTGCTCGGTAGTAACGGTAGTGTGATTCCGCTGTTTAAGCGCC AGATTGAACAGGGTAAGCCTGTGACGGTTACGCATCCAGAAATCATCCGCTACTTCATGACCATTCCTGAAGCGGTGAGT CTTGTGCTTGAAGCCGCTAGTATCGCTCAAGGTGGTGAAATCTTTGTGCTTGACATGGGCATGCCAGTAAAGATTGTAAC GCTTGCAGAAAACTTGATCCGTATGTATGGCAAGGTGCCGTACAAGGATGTTCCTATCAAGTTCACTGGACTTCGTCCGG GTGAAAAGATTAAGGAAGAGCTTTTGATGAACGAAGAAGGCTTGAAGAAGACTAAGAACAAGCTTATCTTCATTGGAAAG CAGATTGACATTGACACTTCCAAGTTCATTAACGAACTCTGGAAACTCAAGAGCGCAGCATCTGAAAACAATGACGAAAT CGCCATTAACGCTCTACACGAAATTGTTCCTACGTTCACGACTCCAGAAAAGTTCAACAGCACGATTTTGAAGAAGTCTG AACCTGTAGAACAGAAGAATTAA Protein sequence : MVLTTSFGVCLFRYMFRNAFISIINTGHREAMKKRTMIIGAGNATKLLLDEIRNSAKDAEKGVATSNASKINPVCLIDDD RYKIGKPFEGVLVAGTTSDIPKIAKQENIEQILFSIPSCPPKDRQVIMDLCGKTGLPVKVLPFVGTLLDTSNVGTGETNF ATQIRDIKVEDLLGRDPIKFDNKDIRAYIENKVCMVTGGGGSIGSELVRQIAKYNPKQIIIVDIYENNAYDIQQELVMEY GKSLNLVTLIASVRDYFRMNQIFKTYQPEVIFHAAAHKHVPLMENNPMEAIKNNVIGTFNVATLAMFNNVKKFVMISTDK AVNPTNVMGASKRCCEMIVRFMSMQKESNTEFVVTRFGNVLGSNGSVIPLFKRQIEQGKPVTVTHPEIIRYFMTIPEAVS LVLEAASIAQGGEIFVLDMGMPVKIVTLAENLIRMYGKVPYKDVPIKFTGLRPGEKIKEELLMNEEGLKKTKNKLIFIGK QIDIDTSKFINELWKLKSAASENNDEIAINALHEIVPTFTTPEKFNSTILKKSEPVEQKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-81 | 49 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-81 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| FSU_0179 | YP_005820338.1 | capsular polysaccharide biosynthesis protein | VFG1300 | Protein | 4e-80 | 48 |
