Gene Information

Name : traF (EJP617_08070)
Accession : YP_005817375.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Unknown
Product : Putative plasmid transfer protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 886479 - 887639 bp
Length : 1161 bp
Strand : -
Note : -

DNA sequence :
TTGGGTGCGCTGGCTGCCGGTAATTATTTTGATGCCCGCAACGATGCAATGGGTGGAACTGGCGTAGCTTCTTCCACCTA
TGGATCGGCGGTTCTGGCTAACCCCGCGTTGATCGTCAAAGCTCAGCCACAGGACACAGTCAGTATTATTCTGCCGGCGG
CCGGTGCGCAGCTCAGCGATAAAGACAAACTGGTTGATAAGGTCGATGACCTTTCGGATACCGTCGAACGCTATAAGGCC
ATGCTGGATAACATCACTTTTGAAGATATTCCCCGTCTGCGCGCAGCCAGCGGCGATTTGGCTAACCGACTGCGCGACAT
CCGTGGTGAAAATGCCTGGGGTCAGGCCGGTGCGGCTCTCGCCGTCACGATCCCTGACGACACGCTACCCTTTGCCTTCG
TCACTAAAGCTTACGGCACCGCCTATGGCACCAGTAATGTCACCCAACATGATATCGACTTGTTACAAGGGATCGCAGAC
GCGACGTTATTTCCGTCTTTTGATGACCAGCTGACCTCCACCGCCCTGGGTCGTGCGGCAATTGTCTACGATGTTGGTGT
TGCCGTGGCGCATGAGTTCGATATTGGCGGCCATCCGTTTTCATTAGGTGTTACGCCGAAGCTACAAAAAACCACCTTGT
ACAACTACAGCGCTTCGGTTTATAGCTTTAAAAAATCAGATCTCACCGACGGCAAATATAAAAACACCGATACCGGTTTT
AACCTTGATGTGGGTGCAGCGACCGATTTGGGTGATAACTGGACGCTGGGCCTGAGCGGACAGAACCTGATTTCGCGCGA
TATCGACACTAAAGAAGTGAACGGCTATCAGGACACTTACCAGATCCGCCCGCTGGTGACTTCTGGCCTATCCTTCCACA
CCGAGCGTCTGACTACCGCGCTTGATGTTGATATCACTCCTACCAAGCGCTTCAAAATCCAGCAGGACAGCCAGTACGCG
AGCATCGGTGCCGAATATCGTCTGCTGGACTGGCTGCAATTGCGCGGCGGCTACCGTGCCGATATGAAGTCAAATGACAC
TAACGTGTTTACCGGCGGTGTCGGGATATCACCTTATAATAAGGTGCATCTTTACCTCGCCGGGATGGTGGGTAAAGACA
ACACTTGGGGTGCAGTCGCGCAGCTGAACTTTACTTTCTAA

Protein sequence :
MGALAAGNYFDARNDAMGGTGVASSTYGSAVLANPALIVKAQPQDTVSIILPAAGAQLSDKDKLVDKVDDLSDTVERYKA
MLDNITFEDIPRLRAASGDLANRLRDIRGENAWGQAGAALAVTIPDDTLPFAFVTKAYGTAYGTSNVTQHDIDLLQGIAD
ATLFPSFDDQLTSTALGRAAIVYDVGVAVAHEFDIGGHPFSLGVTPKLQKTTLYNYSASVYSFKKSDLTDGKYKNTDTGF
NLDVGAATDLGDNWTLGLSGQNLISRDIDTKEVNGYQDTYQIRPLVTSGLSFHTERLTTALDVDITPTKRFKIQQDSQYA
SIGAEYRLLDWLQLRGGYRADMKSNDTNVFTGGVGISPYNKVHLYLAGMVGKDNTWGAVAQLNFTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00459.1 unknown Not tested SHI-1 Protein 2e-57 46