Gene Information

Name : dnaB (EJP617_07960)
Accession : YP_005817364.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Unknown
Product : Replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 872908 - 874323 bp
Length : 1416 bp
Strand : -
Note : -

DNA sequence :
ATGGCAGGAAATAAACCCACCAACAAATCCTACGAAAACCGCGAGCCGCGTGACCGTCAGATGGAAGGTCTCAAGCTGCC
ACCGCATTCGCTGGAAGCAGAACAGTCGGTGTTGGGCGGTTTAATGCTGGATAACGAACGCTGGGATAACGTCTCGGAGC
GCGTAGTGGCGAAGGACTTCTTCAGCCGCCCGCACCGGATGATCTTTGCGGAAATGCAGCGCCTGCTGGAACAGAGTAAG
CCGATCGACCTGATCACCCTGTCCGAATCGATGGAAACCAAAGGCGAACTGAGCATGGTTGGCGGTTTCGCCTACCTGGC
CGAGTTATCAAAAAATACGCCAAGCGCGGCTAACATCGGCGCTTATGCGGATATCGTGCGTGAACGTGCGGTCGTGCGTG
AGATGATCGCCGTAGCAAACGAGATCGCCGATGCCGGCTACGATCCGCAGGGGCGCAGCAGCGAAGATCTGCTCGATCTT
GCCGAATCGCGCGTATTCCAGATTGCCGAAAACCGCGCTAATAAAGATGAAGGGCCGAAAAGCGTCGATCAGATCCTCGA
AGCCACTATCGCGCGTATCGAATCGCTGTATCAGACGCCGCACGACGGCGTTACCGGGGTGGATACCGGCTATGGGGATT
TGAATAAGAAAACCGCTGGTCTGCAGCGTTCGGATCTGATTATCGTCGCCGCCCGCCCGTCGATGGGGAAAACCACCTTC
GCCATGAACCTGTGCGAAAACGCGGCGATGTTGCAGCAAAAACCGGTGCTAATTTTCAGCCTTGAGATGCCCGGCGAGCA
GCTGATGATGCGTATGCTGGCATCGCTGTCACGCGTTGACCAGACCCGCATCCGTACCGGCCAGCTTGACGATGAGGACT
GGGCGCGTATCTCCAGCACCATGGGTATTCTGCTGGAGAAGAAGAACATGTTTATCGATGACTCTTCCGGACTGACGCCG
ACTGAAGTGCGTTCGCGTGCGCGCCGTATTTTCCGCGAGCACGGTGGGCTGAGCCTGATTATGATCGACTACCTGCAGCT
GATGCGCGTTCCGGCACTTTCCGATAACCGCACGCTGGAAATCGCCGAGATCTCGCGCTCGCTTAAGGCGCTGGCGAAAG
AGCTACAGGTGCCGGTGGTGGCGTTGTCGCAGCTTAACCGCTCGCTGGAACAACGTGCTGATAAGCGCCCGGTTAACTCG
GATCTGCGCGAGTCTGGCTCCATCGAGCAGGATGCTGACTTGATCATGTTTATCTATCGTGATGAGGTTTACCACGAGAA
CAGCGATTTGAAAGGCGTGGCGGAGATCATCCTCGGTAAGCAGCGTAACGGCCCAATCGGCACCGTGCGCCTGACTTTCA
ACGGCCAGCATTCGCGCTTTGATAATTACGCCGGGCCACAGTACGACGACGAATAA

Protein sequence :
MAGNKPTNKSYENREPRDRQMEGLKLPPHSLEAEQSVLGGLMLDNERWDNVSERVVAKDFFSRPHRMIFAEMQRLLEQSK
PIDLITLSESMETKGELSMVGGFAYLAELSKNTPSAANIGAYADIVRERAVVREMIAVANEIADAGYDPQGRSSEDLLDL
AESRVFQIAENRANKDEGPKSVDQILEATIARIESLYQTPHDGVTGVDTGYGDLNKKTAGLQRSDLIIVAARPSMGKTTF
AMNLCENAAMLQQKPVLIFSLEMPGEQLMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGILLEKKNMFIDDSSGLTP
TEVRSRARRIFREHGGLSLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNS
DLRESGSIEQDADLIMFIYRDEVYHENSDLKGVAEIILGKQRNGPIGTVRLTFNGQHSRFDNYAGPQYDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 2e-94 54
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-100 53
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 3e-100 53
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 6e-100 53
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 6e-98 50
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 7e-87 50
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 7e-87 50
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-82 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 2e-74 44