Gene Information

Name : EJP617_06740 (EJP617_06740)
Accession : YP_005817242.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 728446 - 729561 bp
Length : 1116 bp
Strand : -
Note : -

DNA sequence :
ATGGCCTCTGAACCGCGTTTCAGCCCGCAGCGCGATATGTCGCTGCCGGAATGGCTGCGCTATCGGGTCGTCAGATCAAC
CTTTAGCGCGCAGTACCGTCAGCCATTCTATGAAACCCTGCACTTTCTGCTGGAAAACCGTAAGGCGCTCGACGAAGCCC
TGCACATGATCGGCAACGTCCATACGGACTTTGGCGCACGCTGGCATCCTTACCATGAGCTGGTGCAGGACTGTCTGGAG
GGCGTCAGTGATAACCGCCCGGGGCGCTCCGTGCAGGACGTGCTGGCCGTCTGGGCACCGCGTGAGGAGGCGGCGCTGAT
CGGTGCCGGGATGGAGACCGGCAATATTCCACGCGCGCTGTTGCAGGCGAACAAGCTGATTGTTGCCCGCCAGCGCATTC
TGGGCCAAGTGATTTTCGCCTCGGTATATCCCGCCGTGCTCGGCATTCTTGGCGCGGGGCTGCTTGGCGTCAACAACCTT
GTGCTGGTACCGACGATGAGCCGGATATCCGATCCTGCACGCTGGAGCGGGGCGCTTGGCATGATGAACGGGCTGGCACA
GTGGACCAGCGCCTGGGGGATCGCCGCCGCTGCGGTGACGGGCGGGCTGACTGTTCTGACGTTCTGGTCGCTGCCACGCT
GGCGCGGCAGGCTGCGTCGCTATGCCGATCGCCTGATGCCCTGGTCGGTTTACAAAGACCTGCAGGGCGCGGTGTTCCTG
ATGAACGTTGGGGCGCTGCTCGGTGCCGGCGTGCCGGAGCTGAAAACCCTGCGCACGTTGCACGGGTTCGCTGCGCCGTG
GCTGCAGGAGCGTATCGAGGCGGCGATGGTGTGCATGAGCGAAGGTAACTCTCTGGGGCTGGCGCTGCGCAACAGTGGCT
ATGACTTCCCCAGCCGTGAGGCCGTCAACTACCTCTCCCTGCTGGATGAGGGGGAAAGAGCGGGAGAGCTGATTAGTAAT
TATGCCGACCGCTGGCTGGAGCAGGCTCTGAAGCGCGTGGCGCGGCGAGCCAACGTGACCAAACTTATTTCCCTGGTTCT
GATTATGACTTTCTTCTTACTCATGCTGCAGATGGTGATGCAGATTCAGGACATCAATACTTTTAACGCACACTGA

Protein sequence :
MASEPRFSPQRDMSLPEWLRYRVVRSTFSAQYRQPFYETLHFLLENRKALDEALHMIGNVHTDFGARWHPYHELVQDCLE
GVSDNRPGRSVQDVLAVWAPREEAALIGAGMETGNIPRALLQANKLIVARQRILGQVIFASVYPAVLGILGAGLLGVNNL
VLVPTMSRISDPARWSGALGMMNGLAQWTSAWGIAAAAVTGGLTVLTFWSLPRWRGRLRRYADRLMPWSVYKDLQGAVFL
MNVGALLGAGVPELKTLRTLHGFAAPWLQERIEAAMVCMSEGNSLGLALRNSGYDFPSREAVNYLSLLDEGERAGELISN
YADRWLEQALKRVARRANVTKLISLVLIMTFFLLMLQMVMQIQDINTFNAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilR YP_001402684.1 type IV pilus biogenesis protein PilR Virulence YAPI Protein 2e-88 58
YE3501 YP_001007662.1 type IV pilus integral membrane protein Virulence YAPI Protein 1e-89 57
pilR CAF28491.1 putative integral inner membrane protein Virulence YAPI Protein 4e-88 57
pilR NP_807845.1 hypothetical protein Virulence SPI-7 Protein 2e-58 43
pilR AAC98886.2 PilR Virulence SPI-7 Protein 1e-58 43
pilR NP_458634.1 putative membrane protein Virulence SPI-7 Protein 2e-58 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EJP617_06740 YP_005817242.1 hypothetical protein VFG2314 Protein 5e-90 57