Gene Information

Name : EJP617_06670 (EJP617_06670)
Accession : YP_005817235.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Unknown
Product : IS3 family transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 723390 - 724136 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence :
TTGCACAGTGAAATGCGCCGACTCTGGAAACTGAGTCGGGGCTCCGCGGGTGCGCGCACTCTGGCTGAGATGCTGACCCA
CAACGGTATCCCGATAAGCCGCTATCGTGCCGGACGTCTGATGAAACACCTGAATCTGAGCAGTTGCCAGCCCGGAAAAC
ATCAATACAAGAATGCCCGCCAGGCGCATACGTTTTTACCGAATCTGCTGGAGCGTCAGTTCGCGGTACCAGAGCCAGAT
CGGGTATGGTGCGGAGATATTACGTATATCTGGGCTGGAAATCGCTGGTGCTACCTGGCGATCGTCATGGATCTTTTTGC
CCGCAGAGTTATTGGCTGGAGTCTGTCAGCAAATGCCGATACGGCACTGATAAGTGGTGCGCTGCGAATGGCATATGAGA
CGCGAGACCAGCCGCAGAATGTGATGTTCCATAGCGATCAGGGAAGCCAGTACACGGGTCTGAAATATCAACAGCTTATC
TGGCGATACAGGATGAAACAAAGCGTCAGTCGGCGGGGGAACTGTTGGGATAATAGCCCAATGGAACGCTTCTTCCGCAG
CCTGAAAACGGAGTGGGTACCGGCAAATGGTTACGGGGATCAGGGCGAGGCCGCAGAGAAAATCAGGTGTTATATCCAGC
GCTATTACAACAGCGTCAGACCACATCATTACAATGGCGGTCTGACACCTGAAGAATCAGAGAGCAGATACCGCTCTTAC
CATAAAACCGTGGCCAGAATTACTTGA

Protein sequence :
MHSEMRRLWKLSRGSAGARTLAEMLTHNGIPISRYRAGRLMKHLNLSSCQPGKHQYKNARQAHTFLPNLLERQFAVPEPD
RVWCGDITYIWAGNRWCYLAIVMDLFARRVIGWSLSANADTALISGALRMAYETRDQPQNVMFHSDQGSQYTGLKYQQLI
WRYRMKQSVSRRGNCWDNSPMERFFRSLKTEWVPANGYGDQGEAAEKIRCYIQRYYNSVRPHHYNGGLTPEESESRYRSY
HKTVARIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z5089 NP_290241.1 transposase Not tested LEE Protein 4e-91 86
unnamed AAC31485.1 L0006 Not tested LEE Protein 2e-87 86
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 3e-91 86
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 2e-87 86
unnamed CAI43898.1 putative transposase Not tested LEE Protein 7e-90 85
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 7e-90 85
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 4e-97 84
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-71 62
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-71 62
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-71 62
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-71 62
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-71 62
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-71 62
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-71 62
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-71 62
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 8e-66 59
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 8e-66 59
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 1e-60 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EJP617_06670 YP_005817235.1 IS3 family transposase orfB VFG0785 Protein 2e-91 86
EJP617_06670 YP_005817235.1 IS3 family transposase orfB VFG1122 Protein 8e-72 62
EJP617_06670 YP_005817235.1 IS3 family transposase orfB VFG1484 Protein 4e-66 59