Gene Information

Name : EJP617_35110 (EJP617_35110)
Accession : YP_005820079.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3794640 - 3795452 bp
Length : 813 bp
Strand : -
Note : -

DNA sequence :
GTGATGACGATGTGTCGGGTACTTAATGTCGCCCGGGCCGGGTTCTATGCGTGGCTGCACAACCCGGTCTCGGCGCGTGA
TAAAGATAACCAGCGTCTGCTGACGCTTATCCGTGACTCATATTCACTGAGCGGAGGCGTATACGGTTACCGGCGGGTTC
ATGGCGACCTGAACGAAATCGGGGAAACCTGCGGTAAAAACCGGGTGGGCCGTATTATGCAACTGAACCGGATTAAAGCC
GTGCGCGGCTATAAAGCTCCGCGTCGTATTGCTGGCAGACCTTCAGTGGTTGCCCCTAATCGCGTGCAGCGGCAGTTTAC
TGTTGTCCGGGCCAATCAGGTCTGGGTGACCGATATCACCTACATCCGCACCTGGCAGGGCTGGTTGTATCTGGCGGTGG
TTATCGACCTCTTTGCCCGTAACGTGGTGGGGTGGTCGATGAAGCCCACCCTCTCACGCGAACTGGCACTGGATGCGCTC
ATGATGGCGGTCTGGCGACGAAAACCGGACGGCGAGGTGATTGTGCATAGCGATCAGGGCAGCCAGTACGGCAGCGACGA
CTGGCAACGGTTTTGCCGGGCCAATAACCTGGTCCCGAGTATGAGCCGGCGTGGTAACTGCTGGGATAATGCCGTGGCCG
AATCGTTCTTCAGTTCACTGAAAAAAGAACGGATCAGAAAGCGGATGTATAAAACACGGGATCTGGCCCGCGCGGATATC
TTCGATTACATTGAAGTGTTCTACAACCGGGCCCGGCGTCACAGCCATCTCGGTGGCGTCAGCCCGGAGGCCTTTGAACA
GGCCTCGTCGTGA

Protein sequence :
MMTMCRVLNVARAGFYAWLHNPVSARDKDNQRLLTLIRDSYSLSGGVYGYRRVHGDLNEIGETCGKNRVGRIMQLNRIKA
VRGYKAPRRIAGRPSVVAPNRVQRQFTVVRANQVWVTDITYIRTWQGWLYLAVVIDLFARNVVGWSMKPTLSRELALDAL
MMAVWRRKPDGEVIVHSDQGSQYGSDDWQRFCRANNLVPSMSRRGNCWDNAVAESFFSSLKKERIRKRMYKTRDLARADI
FDYIEVFYNRARRHSHLGGVSPEAFEQASS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB CAB61574.1 transposase B Not tested HPI Protein 4e-40 46
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 4e-40 46
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 3e-41 44
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-42 44
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-40 44
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 3e-41 44
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 3e-44 43
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-44 43
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-44 43
unnamed CAI43898.1 putative transposase Not tested LEE Protein 4e-30 42
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 4e-30 42
unnamed AAC31485.1 L0006 Not tested LEE Protein 1e-29 42
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 1e-29 42
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-45 41
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-45 41
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 4e-30 41
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 5e-30 41
Z5089 NP_290241.1 transposase Not tested LEE Protein 6e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EJP617_35110 YP_005820079.1 integrase catalytic subunit VFG1631 Protein 1e-42 44
EJP617_35110 YP_005820079.1 integrase catalytic subunit VFG0785 Protein 3e-30 41