|
Name : outF (EJP617_03310) Accession : YP_005816899.1 Strain : Erwinia sp. Ejp617 Genome accession: NC_017445 Putative virulence/resistance : Virulence Product : General secretion pathway protein F (Pectic enzymes secretion protein OutF) Function : - COG functional category : - COG ID : - EC number : - Position : 362332 - 363537 bp Length : 1206 bp Strand : + Note : - DNA sequence : ATGCGTTTCCGCTACCAGGCGCTTAATCAGCGCGGCGTCAAAGTTCAGGGCGAAACCGAAGCCGATACGCCACAGCAGGC ACGCCAGCTGCTGCGCGAACAGCAGCTCCAGCCGCTGCGTTTGCAGCCGGTAAAATCAGGTTCCCTGCACGGTGGTGCCT CATCACGCCGTTCGCTGTCAGCCGGCGAACGGGTATTAATGACGCGCCAGCTGGCAACGCTGGTTGGCGCTGCTTTGCCG CTGGAACAGGCGCTGCTGGCGCTGGAAAGGCAGACCACCAAGCCAGCGGGCCGCACCATGCTGCATGCCATCCGTCAGAA GGTGCTGGAAGGTGCCTCACTGGCGGATGCCGTCGGCCTCTACCCCGCCACGTTCCCCCCGCTCTATCAGGCGATGATCG CCGCCGGTGAAGCGTCGGGAAAACTGGATAACGTGCTGGAACAATTAGCCGATTACAGCGAAAAAACGCAGCAGATCAAA AGTAAGCTCACCCAGGCAATGATCTATCCCCTGCTGCTGACGCTGGTGGCCATCAGCGTGATCACCATTTTGCTGACCGC CGTGGTGCCCAGCGTGGTCGAACAGTTCGTGCATATGAAGCAGGCGCTACCGCTTTCCACCCGCCTGCTGATGAGCATCA GCGAGATAACGCGCGCCATCGGCCTGCCGGTGCTGCTGGTTATCCTGCTGGCCGGGTTCATCGCCCGCGTGATGCTGCGC CGCCCGGCACAGCAGTTGCGCTGGCACCAGGCCAAGCTGCGGCTGCCGCTCATCGGCCGTATCGTCCTGAATCTCAACCT GGCACGCTATGCGCGCACCCTCAGTATTCTGACCAACAGCGCCGTACCCCTGCTGGAAGGCATGCATATCAGCGCCACCG TGTTAACCAATCTGTTTATACGCCAACAGCTACAGCTCGCCGCCGAAAGGGTACGCGAAGGCACCACCCTGACGCTGGCG CTGGAACAGACAAAGCTGCTGTCGCCGATGATGGGCCATATGGTAGCCAGCGGCGAAAGCAGCGGTGAACTGGACAGCAT GCTGACCAAAGCAGCCGATATTCAGGACAGCGCCTTTCTCAGCCAGATGACGCTGGCAGTCAGCCTGTTTGAACCCCTGC TGGTGGTGGTGATGGCAGGCGTGGTGCTGTTTATCGTACTGGCCATTTTGCAACCGATTTTACAACTTAACAGTCTGATA GGATAA Protein sequence : MRFRYQALNQRGVKVQGETEADTPQQARQLLREQQLQPLRLQPVKSGSLHGGASSRRSLSAGERVLMTRQLATLVGAALP LEQALLALERQTTKPAGRTMLHAIRQKVLEGASLADAVGLYPATFPPLYQAMIAAGEASGKLDNVLEQLADYSEKTQQIK SKLTQAMIYPLLLTLVAISVITILLTAVVPSVVEQFVHMKQALPLSTRLLMSISEITRAIGLPVLLVILLAGFIARVMLR RPAQQLRWHQAKLRLPLIGRIVLNLNLARYARTLSILTNSAVPLLEGMHISATVLTNLFIRQQLQLAAERVREGTTLTLA LEQTKLLSPMMGHMVASGESSGELDSMLTKAADIQDSAFLSQMTLAVSLFEPLLVVVMAGVVLFIVLAILQPILQLNSLI G |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-71 | 53 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-71 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| outF | YP_005816899.1 | General secretion pathway protein F (Pectic enzymes secretion protein OutF) | VFG2049 | Protein | 6e-68 | 52 |
| outF | YP_005816899.1 | General secretion pathway protein F (Pectic enzymes secretion protein OutF) | VFG0181 | Protein | 5e-66 | 50 |
| outF | YP_005816899.1 | General secretion pathway protein F (Pectic enzymes secretion protein OutF) | VFG1870 | Protein | 4e-61 | 42 |
