Gene Information

Name : outE (EJP617_03300)
Accession : YP_005816898.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Virulence
Product : General secretion pathway protein E (Type II traffic warden ATPase) (Cholera toxin secretion protein EpsE)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 360864 - 362330 bp
Length : 1467 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCAGCCACTTTTTCCCTTCAGCTGGGTACAGCAGCATAACGTACTGCTGCTACCGGATGGCGCATCCGTGGCGCT
GTGCTTCCATTCCGGCAGCAGTATGTCTGCCATTCTGGAAGCACGCCGCCATGCCCCTGAAGCCAGTCTGCAGCTGCTTG
CCGAAGACATTTTTCGTCAGAAGATGAGCGATGCCTATCAGCAAAACGCCTCCTCAACGCAGATGTTTGAAACGCTGGGT
AGCGAGTTTGATCTTGATCAGCTGGTGGATGGGCTGCCCGAGGATAACGATTTGCTCGACAGCGACGATGGCGCCCCGGT
TATCCGCCTGATCAATGCCATCCTCAGTGAGGCTATCAAAGAAGGGGCCTCCGATATTCATATCGAGCCATTTGAGAAGA
AGCTGAGCGTACGCTTCCGCATTGACGGCATGCTGCGCACTATCCTGTCCCCTCCGGCACAGCTCAGTCGTTACCTGTTA
TCGCGTATTAAAGTCATGGCAAAGCTTGATATTGCGGAAAAACGCATCCCGCAAGATGGGCGTATTTCTCTGCGTCTGGG
CGGCAGAAATATCGACGTGCGCGTCTCAACTCTGCCTTCGCGTCACGGTGAGCGCATCGTGCTGCGCGTACTGGATAAAA
ATGGACTGACGCTGAACCTGGCTGATATCGGCATGTCACCGCAGGCGGAGCAGGCGATGAATCGTCTGCTGAAGACGCCG
CACGGCATCCTGCTGGTGACCGGGCCAACCGGTTCGGGGAAAAGTACCACGCTGTATGCCGGGCTTAAGCTTATCCACAG
CGACGACAAAAATATCATGACCATTGAAGATCCGGTGGAATACGAACTGGAAGGGATTGGACAGACGCAGGTCAACAGCA
AAGTGGATATGACATTCGCCCGTGGTCTGCGCGCCATTCTGCGCCAGGACCCGGATATCGTGATGATTGGTGAGATCCGC
GACGGCGAAACCGCGCAGATCGCCGTTCAGGCTTCGCTCACCGGGCACCTGGTGCTCTCCACGCTGCATACCAACAGCGC
TTTCGGTGCCATTGAGCGCCTGCGCGATATGGGGGTCGAACCCTTTCTGCTCGCCAACTCGCTGATTGGCGTGCTGGCTC
AGCGCCTGGTCCGCAGGCTGTGTCCCGCCTGCCGTCAACCGGGTGCGGCAACCGCTGTTGAGCTGGCGCATTTTTCCCCC
AGCCCGCCATCGGGCATTCAGCTGTGGCGGGCTGTCGGCTGCGAAAAGTGTAATAACAACGGCTATCGTGGGCGTGTCGG
CATTTATGAATTGCTGACGATTGATGATGCGCTCCGCCAGGCAATTGGCCAGAACAAGAGCGAAAACGAGCTGAGCCAGC
TGGTGAACGCTGACTATTGCTCTTTACAACAGGACGGCCTGCAAAAGGTGCTCACCGGCATGACCACGCTCGAAGAGATC
CTTCGCGTCACACGCGAGGCGCATTGA

Protein sequence :
MSQPLFPFSWVQQHNVLLLPDGASVALCFHSGSSMSAILEARRHAPEASLQLLAEDIFRQKMSDAYQQNASSTQMFETLG
SEFDLDQLVDGLPEDNDLLDSDDGAPVIRLINAILSEAIKEGASDIHIEPFEKKLSVRFRIDGMLRTILSPPAQLSRYLL
SRIKVMAKLDIAEKRIPQDGRISLRLGGRNIDVRVSTLPSRHGERIVLRVLDKNGLTLNLADIGMSPQAEQAMNRLLKTP
HGILLVTGPTGSGKSTTLYAGLKLIHSDDKNIMTIEDPVEYELEGIGQTQVNSKVDMTFARGLRAILRQDPDIVMIGEIR
DGETAQIAVQASLTGHLVLSTLHTNSAFGAIERLRDMGVEPFLLANSLIGVLAQRLVRRLCPACRQPGAATAVELAHFSP
SPPSGIQLWRAVGCEKCNNNGYRGRVGIYELLTIDDALRQAIGQNKSENELSQLVNADYCSLQQDGLQKVLTGMTTLEEI
LRVTREAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 7e-124 60
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-124 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
outE YP_005816898.1 General secretion pathway protein E (Type II traffic warden ATPase) (Cholera toxin secretion protein EpsE) VFG0182 Protein 3e-132 59
outE YP_005816898.1 General secretion pathway protein E (Type II traffic warden ATPase) (Cholera toxin secretion protein EpsE) VFG2048 Protein 3e-125 59
outE YP_005816898.1 General secretion pathway protein E (Type II traffic warden ATPase) (Cholera toxin secretion protein EpsE) VFG1876 Protein 2e-119 51
outE YP_005816898.1 General secretion pathway protein E (Type II traffic warden ATPase) (Cholera toxin secretion protein EpsE) VFG2426 Protein 2e-79 47
outE YP_005816898.1 General secretion pathway protein E (Type II traffic warden ATPase) (Cholera toxin secretion protein EpsE) VFG1880 Protein 2e-82 45