|
Name : outD (EJP617_03290) Accession : YP_005816897.1 Strain : Erwinia sp. Ejp617 Genome accession: NC_017445 Putative virulence/resistance : Virulence Product : General secretion pathway protein D Function : - COG functional category : - COG ID : - EC number : - Position : 358927 - 360864 bp Length : 1938 bp Strand : + Note : - DNA sequence : ATGAAAACGAGATCCCCCCAATACGCGACTAACACCCGGCGGCTGTTACCGCTGCTGCTGATCTGCACGTTATTTTCTTC CCCTGTGCAGGCGGAAGGCTATCAGGCGAGCTTTAAAAATACCGAGATCGACGAGTTTATTAACACCGTAAGTAAAACCC TAAATAAAACTATTATTATCGATCCTACGGTGAAGGGAAAAATTAGCGTACGCAGTTACGAAACCCTTGATGCGCAACAG TATTATCAGTTTTTCCTCAGCGTACTTGAGGTTTACGGCTATACCGCTATCAACATGGATAATGGCGTCCTGAAAATTAT CCCTTCAAAAAATGCGAAAGGTGCCGCCGTGCCGTTTGTCACGGGTAGCGCCAGCGCCGCTGGCGATGAAATCATTACCC GGGTGGTGCCACTGCAATTCGTCACGGCAAAAGACCTGGCCCCCTTATTGCGCCAGCTTAACGATGCCGCAGCAGGCAGC GTCGTCCATTACGACCCCAGTAACGTGTTATTAATGACCGGCAGAGCTGCGGTCATCAGCCAGCTGATGGCCATTGTCGA AAGTATCGATCTGCCGGAAGACACCACGGTGGATACCGTGAAATTGCAGTGGGCTTCGGCCCCTCAGGTCGCTGAAATCC TTAATTTCATAAACGGTGATAGCAAAAAAACAGGCAGCAATAAGCCGTTCGCCAAAGCCGTCGCGGATACGCGCACCAAT GCCGTACTGATTACCGGCGACGAGCTGGCACGCCAGCAGCTGGTCGATGCGGCCAGAAATCTGGATGAAGAGAAAGACCG CAGCAGCAACTCCAGGGTGTTTTATCTGAAGCACGCTAAGGCCGAAAATCTGTTAGAGGTGCTGAGCGGCGTAAGCAGCA CCATGCAGGATAAATCCGAATCTAAGACGGCCAGCCCTGTCGCGATGACAAAAGACATCGTCGTAAAGGCCGATACCCAT ACCAACTCACTGATTATCAATGCTCCGCCGGATGTGATGGGCGATCTTGAGGAGATTATTACCCAGCTCGATATCAGTCG TGCTCAGGTTCAGGTAGAAGCGATCATCGTTGAGGTTCAGGACGCCGACGGCCTGGCGCTGGGCGTCCAGTGGTTTAACA AAAACGGCGGTGGAACGCAATTTCCGGCGGCCGATGCTCCGGTCAGTAATCTGATTGGTAGCACCGTTGCCGAAACGCTT AGCAAGGCCAATGGTCTGGCCGCCGGATTTTATCACGGCAACTGGGCAGGGTTATTTAATGCCCTGCAAACCAACAGTCA GAATAATATCCTGGCAACGCCGAGTATTGTGACGCTGGACAATATGGAAGCAGAGTTTACCGTTGGCCAGGATGTGCCGA TCCTGACCGGCTCACAAACCACCAGCGGCGATGGCGTGTTCAATTCGGTCGACCGCAAAAGCGTCGGTATCAAACTGAAA GTCAAGCCGCAAATCAATAAAGGCGACTCGGTGCTGATGGAGATTGAGCAGGAAGTCTCCAGCGTGGCCGAACAAAGTTC GGTTGATCCGCTGGGAGCCACCTTTAATACCCGTCTGGTGAAAAATACGGTTCTGGTTGAAAGCGGAAAAACCGTGGTGG TAGGCGGGCTTCTGGACACCACGCATAATAAAGTGGAGAGCAGCGTCCCGGTGCTCGGCAAAATCCCGTTATTAGGAGCG CTTTTCCGCTATACCACTGATAAACAGAGTAAACGCAACCTGATGCTGTTTATCCGCCCCACCATTATTCGTCAGCAGGA TAGCTTTGACCGCACCAGCGACAGCAAGCTGGAGAAATTCCGCGAGAAGCTCGACAACGACGAAGGTGACAAACGCATTG GTAAAGCCATTGATGAAAATCTGTCAATAAAGCAGAGCAACCAGGCGCTGGTGGAAATACAGAATAATATCGCTGATTTT TATCGGAAAAAAGCCTGA Protein sequence : MKTRSPQYATNTRRLLPLLLICTLFSSPVQAEGYQASFKNTEIDEFINTVSKTLNKTIIIDPTVKGKISVRSYETLDAQQ YYQFFLSVLEVYGYTAINMDNGVLKIIPSKNAKGAAVPFVTGSASAAGDEIITRVVPLQFVTAKDLAPLLRQLNDAAAGS VVHYDPSNVLLMTGRAAVISQLMAIVESIDLPEDTTVDTVKLQWASAPQVAEILNFINGDSKKTGSNKPFAKAVADTRTN AVLITGDELARQQLVDAARNLDEEKDRSSNSRVFYLKHAKAENLLEVLSGVSSTMQDKSESKTASPVAMTKDIVVKADTH TNSLIINAPPDVMGDLEEIITQLDISRAQVQVEAIIVEVQDADGLALGVQWFNKNGGGTQFPAADAPVSNLIGSTVAETL SKANGLAAGFYHGNWAGLFNALQTNSQNNILATPSIVTLDNMEAEFTVGQDVPILTGSQTTSGDGVFNSVDRKSVGIKLK VKPQINKGDSVLMEIEQEVSSVAEQSSVDPLGATFNTRLVKNTVLVESGKTVVVGGLLDTTHNKVESSVPVLGKIPLLGA LFRYTTDKQSKRNLMLFIRPTIIRQQDSFDRTSDSKLEKFREKLDNDEGDKRIGKAIDENLSIKQSNQALVEIQNNIADF YRKKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-101 | 43 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-107 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| outD | YP_005816897.1 | General secretion pathway protein D | VFG2047 | Protein | 8e-99 | 43 |
