Gene Information

Name : tpx (EJP617_29800)
Accession : YP_005819548.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3232396 - 3232899 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTCAGACCGTACATCTTCAGGGCAATCCGGTTTCCGTAGATGGCCAGCTGCCCACCAAAGGCCAGGCGGCAAAGCC
ATTTACCCTGGTAGCCAAAGACCTTTCAGATGTCTCACTGTCTCAGTACGCGGGTAAACGCAAGGTGTTGAATGTTTTCC
CCAGCGTTGATACGGGATTGTGTGCCACTTCCGTGCGCAAATTTAACCAGCTGGCCAGTGAGATCGATAATGCCGTGGTA
TTGTGCATTTCTGCTGACTTGCCGTTCGCACAGTCACGCTTCTGCGGCTCAGACGGTCTGAACAACGTGGTGACCCTTTC
CACCCTGCGCGGCCACGCCTTCCTGAAAGATTATGGCGTGGCGATCGTCGATGGCCCCTTAAGCGGCCTGGCTGCCCGTG
CAGTCATCGTCCTGGACGAAAACGATACGGTCATTTATAGCCAGCTGGTCAATGAAATCTCCACCGAACCCGATTACGAT
GCGGCTCTTGCAGCCTTGAAATAG

Protein sequence : 
MSQTVHLQGNPVSVDGQLPTKGQAAKPFTLVAKDLSDVSLSQYAGKRKVLNVFPSVDTGLCATSVRKFNQLASEIDNAVV
LCISADLPFAQSRFCGSDGLNNVVTLSTLRGHAFLKDYGVAIVDGPLSGLAARAVIVLDENDTVIYSQLVNEISTEPDYD
AALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-32 47
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-32 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-32 47
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 7e-33 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_005819548.1 thiol peroxidase VFG0087 Protein 3e-33 47