Gene Information

Name : palI (EJP617_29700)
Accession : YP_005819538.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Unknown
Product : Sucrose isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3220388 - 3222187 bp
Length : 1800 bp
Strand : -
Note : -

DNA sequence :
ATGTCACGTTTTACACTCAGTACGGTCATGGCACTTTTAGTGGCTCCTGTTTTATCTGTTTTACCAGGCCAGGTTATGGC
TGGCAAAATGGATATGGCAACAACACAATTAGCGCAGAAGTCTGATGATTTTCCAGCATGGTGGAAACAGGCCGTTTTTT
ATCAGGTATATCCGCGTTCCTTTAAAGATACCAACGGTGATGGGATAGGCGATCTTAAAGGCATCATTGAAAAACTTGAT
TATTTGAAGCGTTTGGGCGTTGATGCTATCTGGATTAACCCGCATTATGACTCGCCTAATACCGATAACGGTTATGATAT
CCGTGACTACCGCAAGATCATGAAAGAATACGGTACGATGGAAGATTTTGATCGACTCATTGCCGAAATGAATAAACGTA
ATATGCGTTTGATGATTGACATTGTGATCAACCATACCAGCGATCAACATAGCTGGTTTGTGCAAAGTAAAGGCAGCAAA
GATAATCCATATCGTGATTATTACTTCTGGCGTGATGGCAAAAATGGCCAGCCGCCCAATAATTATCCCTCATTCTTCGG
CGGCTCTGCATGGAAGAAAGAGGATAATTCCGGGCAGTACTATCTGCATTATTTTGCCACGCAGCAACCGGATCTTAACT
GGGATAATCCCAAAGTACGTGAAGACCTCTATGCGATGCTACGCTTTTGGCTGGACAAAGGGGTCGCGGGGCTTCGTTTT
GACACGGTGGCCACCTATGCCAAAATCCCGGGTTTCCCCGATCTCACACCTCAACAGCGGAAAAACTTCGCAAGGACATA
TACCGAAGGGCCATCTATTCACCGCTATATTAAAGAAATGCACCAGCAGGTTTTCTCACATTATAATATCGCCACGGCCG
GGGAGATATTTGGCGTTCCTTTAGAGAAGTCAATTGACTATTTCGACAGACGCCGTGGCGAACTCAATATTGCCTTTACT
TTTGACCTGATTCGTCTGGACAGAGGGGTAGAAGAGAGATGGCGTCAGAAAGCCTGGAGTTTGACGGATTTCCGCCAAAC
GATCGACAAGGTTGACCGTGTGGCGGGGAAATATGGCTGGAATGCTTTCTTCCTGGATAATCATGATAATCCTCGTGCCG
TATCGCATTTTGGCGACGATCGGCCTCAGTGGAGACAAGCATCGGCTAAAGCGCTGGCAACCTTAATGATCACCCAGCGC
GCGACGCCTTTTATATATCAGGGATCTGAACTGGGTATGACGAATTACCCCTTTAAGTCCATCGCTGATTTTGACGACAT
AGAGGTAAAAGGATTTTGGCAGGATTACGTCAGCAGCGGCAAGGTCGATCCCGAAGAGTTTATGCGCAACGTGCGTCTGA
CCAGCCGGGATAACAGCCGAACGCCGTTTCAGTGGGATGAAAGTGCCAATGCAGGATTTACCTCCGGAACGCCGTGGTTC
AACGTCAATCCGAATTATAAGCTGATAAACGCTGCGGATCAGACCAGGGATCCGGACTCGGTGTTCAATTATTATCGCAA
GCTGATCGGCCTGCGACATGCCATCCCGGCGCTTACCTATGGTGAGTATAAAGATCTGGACCCCAACAACGACACGGTTT
ATGCCTTTACCCGCACTCATGGGGATAAGCGATATTTAGTGGTAATTAACTTTAAGGAAAATGTGGTCAATTACCGGCTG
CCAGATCAACTCACCATCAGGCAAACCTTATCAGAGAGTAGCGCCATTCAGCCCGTTGCGGAAAACGCGCGAGAACTTTT
GCTACAACCCTGGCAGTCAGGGATTTACCAGCTCAACTAA

Protein sequence :
MSRFTLSTVMALLVAPVLSVLPGQVMAGKMDMATTQLAQKSDDFPAWWKQAVFYQVYPRSFKDTNGDGIGDLKGIIEKLD
YLKRLGVDAIWINPHYDSPNTDNGYDIRDYRKIMKEYGTMEDFDRLIAEMNKRNMRLMIDIVINHTSDQHSWFVQSKGSK
DNPYRDYYFWRDGKNGQPPNNYPSFFGGSAWKKEDNSGQYYLHYFATQQPDLNWDNPKVREDLYAMLRFWLDKGVAGLRF
DTVATYAKIPGFPDLTPQQRKNFARTYTEGPSIHRYIKEMHQQVFSHYNIATAGEIFGVPLEKSIDYFDRRRGELNIAFT
FDLIRLDRGVEERWRQKAWSLTDFRQTIDKVDRVAGKYGWNAFFLDNHDNPRAVSHFGDDRPQWRQASAKALATLMITQR
ATPFIYQGSELGMTNYPFKSIADFDDIEVKGFWQDYVSSGKVDPEEFMRNVRLTSRDNSRTPFQWDESANAGFTSGTPWF
NVNPNYKLINAADQTRDPDSVFNYYRKLIGLRHAIPALTYGEYKDLDPNNDTVYAFTRTHGDKRYLVVINFKENVVNYRL
PDQLTIRQTLSESSAIQPVAENARELLLQPWQSGIYQLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 2e-124 45