Gene Information

Name : sicA (EJP617_27350)
Accession : YP_005819303.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Virulence
Product : Type III secretion chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2960272 - 2960829 bp
Length : 558 bp
Strand : +
Note : -

DNA sequence : 
ATGGAGTATGAGAATATAGCGAAAGATTCGAACGCTCAAAATCAATCCCAAAACGATGATGAACTGGAAGAATACTCTGA
TAATCTCATTGAAGCGATCCAGCATGGCGCTGTTCTTAAAGATGTGCAGGGTGTTACTAATGATACGATGAACGATATCT
ATAAAATAGCGTACGAATTTTATCATCTGGGTAGATTAGACGACGCTGAATCTCTTTTTCGTTTTTTATGTATCTATGAT
TTTTATAACTCTGAGTATACCATGGGTCTTGCCGCAGTTTATCATTTAAAAAAGAATTACCGCAAAGCTATAGATTTCTA
TGCTTTGGCTTATTCCTTATCAAATGAGGATTACCGACCCATGTTTTATGCCGGGCAGTGTAATTTATTGTTGCGTCAAG
AAGTTCTGGCTAGAAAATGTTTTACTATAGTTATGAACAAGTGCACCATTATACAGCTTAAAGAAAAAGCAGAAAAGTAT
CTGTCAGCACTCGATGAAATGAGTGCAGATACAAACATGAATACTGAAAATAAATGTAACAAACAGGAGGCACAATGA

Protein sequence : 
MEYENIAKDSNAQNQSQNDDELEEYSDNLIEAIQHGAVLKDVQGVTNDTMNDIYKIAYEFYHLGRLDDAESLFRFLCIYD
FYNSEYTMGLAAVYHLKKNYRKAIDFYALAYSLSNEDYRPMFYAGQCNLLLRQEVLARKCFTIVMNKCTIIQLKEKAEKY
LSALDEMSADTNMNTENKCNKQEAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sicA YP_217805.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 3e-38 50
spaT NP_457280.1 unknown function Virulence SPI-1 Protein 3e-38 50
spaT NP_806489.1 hypothetical protein Virulence SPI-1 Protein 3e-38 50
sicA NP_461807.1 secretion chaperone Virulence SPI-1 Protein 3e-38 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sicA YP_005819303.1 Type III secretion chaperone VFG2451 Protein 1e-44 55
sicA YP_005819303.1 Type III secretion chaperone VFG0547 Protein 8e-39 50
sicA YP_005819303.1 Type III secretion chaperone VFG0988 Protein 4e-37 47
sicA YP_005819303.1 Type III secretion chaperone VFG1769 Protein 4e-36 44