Gene Information

Name : spaS (EJP617_27340)
Accession : YP_005819302.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein SpaS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2959026 - 2960117 bp
Length : 1092 bp
Strand : +
Note : -

DNA sequence : 
TTGGCACAAAAGACAGAACTTCCTACGGAAAAAAAGCGAAAAGATTCTGCCAAAAAAGGGCAGTCCTTGAAAATTAAGGA
TTTTATTACCACGGTTACACTCATCTCCGGTAGCTACTTTCTACTTTATGGGATGGACTTCAGCAGTTTTATATCCTATT
ATTCTAAAGTTTTGCTCAATGAAAACTCGGTGAACATCGATGATTTTATGCTGCAAATGATGTACATTTTTCTGCAACTC
TCGTTTCCTCTAATCGGTGTTTGTTGTTTGTCAGGAATAATAGCCACGCTGTTTCAAACGCGCTTTACTATTGCCACGCA
AGCGTTAAAGCTCAACTTCAAAGCTTTGAATCCTGTTGAAGGTATAAAAAAGATTTTTAGCATGCGAACTGTGAAGGAAT
TCATCAAATCTTTATGCTATTTGATGGTCTTCTTATTCACTTGTTACAACTTTATCACTAACGATCTAAAACATGCATTG
GTTATTCATCATGCGGGTATCGGCCAGTTGATCGTAAGTTTGTTATCATTAACAGTCAAAGCGGTTACGATTTTCATTGC
TTATTCGTTCTTTGTTCTCTGCGCTGATTTCATTATGGAATACTTCTTACATGTTAAAGATTTAAAAATGGATAAACATG
AGGTAAAACAAGAGCATAAAGAAAGTGATGGAAACCCGCAAATAAAAAGTGCCAGGCGACGTGCGCATCAGGAACTGCTT
TCCGGGGAAGAAATGGCGGCTGTCAGAAACTCGTCGGTGGTCATGGCAAACCCAACGCATATTGCTATGGCTATTTATTT
CAATCCTCAGGTTGCCTCGTTGCCTTTCATTGCTTTACGAGCTTCCAACTTCAAAGCTAAAGCTGCTTTATTATATGCGG
AGGAAATTGGCATCCCTGTTGTCCGCAATGTTTTGCTAACACGACGTCTTTATAAATCTTATGTTCAGTACAGCTTTATT
TCAATTAATGATGATGATTTGATGGCAGTGATGGATATTCTCATTTGGCTCCGTCAGGTCGAGATAGCTGGTATGGAAAG
CGCGGTACCTTCCAGCGATGTGACTAACGACGAACGCCTAACGGATGAATAA

Protein sequence : 
MAQKTELPTEKKRKDSAKKGQSLKIKDFITTVTLISGSYFLLYGMDFSSFISYYSKVLLNENSVNIDDFMLQMMYIFLQL
SFPLIGVCCLSGIIATLFQTRFTIATQALKLNFKALNPVEGIKKIFSMRTVKEFIKSLCYLMVFLFTCYNFITNDLKHAL
VIHHAGIGQLIVSLLSLTVKAVTIFIAYSFFVLCADFIMEYFLHVKDLKMDKHEVKQEHKESDGNPQIKSARRRAHQELL
SGEEMAAVRNSSVVMANPTHIAMAIYFNPQVASLPFIALRASNFKAKAALLYAEEIGIPVVRNVLLTRRLYKSYVQYSFI
SINDDDLMAVMDILIWLRQVEIAGMESAVPSSDVTNDERLTDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaU AAS66849.1 YsaU Not tested SSR-1 Protein 4e-94 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaS YP_005819302.1 surface presentation of antigens protein SpaS VFG1015 Protein 2e-55 42
spaS YP_005819302.1 surface presentation of antigens protein SpaS VFG1770 Protein 3e-60 42