Gene Information

Name : invA (EJP617_27270)
Accession : YP_005819295.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Virulence
Product : Type III secretion apparatus InvA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2951333 - 2953414 bp
Length : 2082 bp
Strand : +
Note : -

DNA sequence :
GTGAATATGTTAAGTAATATTATTGGGCAAATTCGAACCCGTCCTGAGCTAATCGTCTTGCTGATGATGATCATGGTCGT
CGTTATGCTGATAATTCCACTGCCAACATACCTGGTCGATTTTTTTATCGCACTAAATTTGACAATGGCATTATTGATTT
TCATCGGCTCATTCTATATAAACAGAATTTTGGATTTTTCGACGTTCCCATCTATGATTATGATCAGTACCATATTTCGT
CTGGCTATTTCTATCAGTACTAGCCGCTTAGTTCTAACCGACGCGGATGCTGGTAAAATTATTTCGAGTTTCGGTGAATT
CGTTATTGCAGAAAGTCTTGTAGTTGGGATGGTTATTTTCTTTATCGTCACAGTAGTACAGTTTATCGTCATTACAAAAG
GCTCTGAGCGTATTGCCGAGGTTGCAGCCCGCTTTTCTTTAGATGCCATGCCGGGTAAGCAAATGAGTATTGATGCTGAC
CTGAAAGCAGGCGTGATCGATGAAAAAGAGGTTAGACGGCGCCGTAGCGATCTGGAGGCTGAAAGTCAGCTTTATGGTGC
TCTGGATGGCGCAATGAAGTTTATCAAAGGTGATGCTATCGCCGGGATAATTATTATTTTAGTTAACCTAATTGGAGGAC
TCGCTATTGGTGTAGTGCAGAAAGGGATGAATATATCACATGCCTTGTCCATATATGCATTGTTGACCATTGGTGAGGCT
TTAGTTGCCCAAATCCCCGCATTACTTATCTCAATAAGCGGTGGATTGATTGTAACGCGCGTAAATAATAATGAAAATAC
AAATTTAGGTGCTAAGATACTGCAAGATCTTTTTCTCAATAAGTCAACCTTAGTGATAACAGCAATATTAGCCGTTACAT
TAGGCTTATTGCCCGGATTCCCATTAATTGTATTTCTTTTACTGGCTATTATTCTACTTGGGGTCTTTTATAAGGATAAA
TACAATAAAAATAAGAATAACAGTCTTGATCCAGATGACTCAGAGGTTGCAGAACAGTCCACTGTCAAAAGTAAGCCTGT
AGTTATAGATGGAGAATACATTCCTGAGACTGTTCCGCTTATCGTGAGTTCCTGGAATGGATATGAAAAATATTTTGCCA
AGAATAATTTTTCTTCTTTACTGAAACGCCATTTTTTCATCGAGTATGGCGTTCGTCTGCCTGATTTGATCATGAATTAT
GACCAGCATGTTGAACAGGGCAAGTTGACTGTTGCTATCAATGAAATACAGGTCGCAAGTTATGATTTTTTCCCTGAAAT
GCACAAAGTTCTTTTCAGAGGAGATGAGTTAAAATTAATTGATGACCACGTAAAGGTGGTAAATACTGCCCATGGAAAAA
CCTACTGGATACCTGAGGGAAGACATGAAACAGCTTTGAAACTCGGATTTTACTCAAGGGATGCAGTTAACGAATTTTAC
TCCTGTATATCTACGTTACTCGTTCATAATATTTCTGAGTTTTTTGGTATTCAGGAAGCCAAGACGTTGCTTGACGACCT
TGAGAAGAAATATCCTGACTTGCTTAAAGAGTGCTACCGAAATAATACAGTTCAACGAATCACTGAAGTGTTTCAACGGT
TACTCAAGGAGCGTATTTCAATCAGAAATATGCGTTTGATTCTCGAGGCATTAGTCCAGTGGGCTCCGAAGGAGAAAGAT
CCTATTATGCTGGTTGAACATGTACGTGGAGTTTTAGCACGCTATATTTCAAGCCGATTCTCAGCTGAAGGTCGTATCAG
AACTGTGGTGATGTCGCATGATATGGAGAGTATTATCCGTGACGGCATCCGCCAGACTTCTGGGGGTACATTTATCAACC
TGCCCCCATTAGAAACAGAAAATATAATAAAATCTCTCGAAATATGCATGCAGAACAATAGGGTACACGCAAGAGACATT
ATTCTAATGGTATCTATGGATATCAGACGCTTTGCTAAAACCATCATTGAAGGGACTTACTCAGAATTAGATGTACTCTC
TTTTAGTGAGGTCTCTGCCGGTGTGGAAATTGACGTCATTGGTTCATTAGAAAACTATAGTGAGGCTTTAAATGAAATAT
GA

Protein sequence :
MNMLSNIIGQIRTRPELIVLLMMIMVVVMLIIPLPTYLVDFFIALNLTMALLIFIGSFYINRILDFSTFPSMIMISTIFR
LAISISTSRLVLTDADAGKIISSFGEFVIAESLVVGMVIFFIVTVVQFIVITKGSERIAEVAARFSLDAMPGKQMSIDAD
LKAGVIDEKEVRRRRSDLEAESQLYGALDGAMKFIKGDAIAGIIIILVNLIGGLAIGVVQKGMNISHALSIYALLTIGEA
LVAQIPALLISISGGLIVTRVNNNENTNLGAKILQDLFLNKSTLVITAILAVTLGLLPGFPLIVFLLLAIILLGVFYKDK
YNKNKNNSLDPDDSEVAEQSTVKSKPVVIDGEYIPETVPLIVSSWNGYEKYFAKNNFSSLLKRHFFIEYGVRLPDLIMNY
DQHVEQGKLTVAINEIQVASYDFFPEMHKVLFRGDELKLIDDHVKVVNTAHGKTYWIPEGRHETALKLGFYSRDAVNEFY
SCISTLLVHNISEFFGIQEAKTLLDDLEKKYPDLLKECYRNNTVQRITEVFQRLLKERISIRNMRLILEALVQWAPKEKD
PIMLVEHVRGVLARYISSRFSAEGRIRTVVMSHDMESIIRDGIRQTSGGTFINLPPLETENIIKSLEICMQNNRVHARDI
ILMVSMDIRRFAKTIIEGTYSELDVLSFSEVSAGVEIDVIGSLENYSEALNEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaV AAS66840.1 YsaV Not tested SSR-1 Protein 0.0 64
invA YP_217815.1 invasion protein Virulence SPI-1 Protein 5e-142 50
invA NP_457290.1 possible secretory protein (associated with virulence) Virulence SPI-1 Protein 5e-142 50
invA NP_806499.1 virulence-associated secretory protein Virulence SPI-1 Protein 5e-142 50
invA NP_461817.1 needle complex export protein Virulence SPI-1 Protein 5e-142 50
ECs3731 NP_311758.1 EivA Not tested LIM Protein 2e-141 50
invA AAS66860.1 InvA Not tested SSR-2 Protein 4e-135 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
invA YP_005819295.1 Type III secretion apparatus InvA VFG1780 Protein 2e-155 54
invA YP_005819295.1 Type III secretion apparatus InvA VFG1006 Protein 3e-126 50
invA YP_005819295.1 Type III secretion apparatus InvA VFG0557 Protein 2e-142 50
invA YP_005819295.1 Type III secretion apparatus InvA VFG0064 Protein 3e-104 41