Gene Information

Name : prgI (EJP617_27220)
Accession : YP_005819290.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Virulence
Product : Type III secretion needle MxiH like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2945647 - 2945919 bp
Length : 273 bp
Strand : -
Note : -

DNA sequence :
ATGACAGACCCGTTCAAAGATAATGCCACATCCAGTGCCAAAGATGGGCATTTTTTAGATGAGATTTCTGCTGCGTTCGA
AAGTGGGGCTAAAAATATGATGGAAGCCCTGAATCTTGCACAAAGTAATCTTGAACTTAACCCTTCTGATCCTTCAGTGT
TGGCTAGCTATCAGGCAAAACTTCAAGAATATACTCTATTTCGTAACGCCCAAACCAGCACTATAAAAGCCTATAAGGAT
ATTGCTGCTGCAATTATACAAAACTTCCGTTAA

Protein sequence :
MTDPFKDNATSSAKDGHFLDEISAAFESGAKNMMEALNLAQSNLELNPSDPSVLASYQAKLQEYTLFRNAQTSTIKAYKD
IAAAIIQNFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaG AAS66835.1 YsaG Not tested SSR-1 Protein 1e-13 61
prgI NP_457267.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 6e-10 55
prgI NP_806476.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 6e-10 55
prgI NP_461794.1 needle complex major subunit Virulence SPI-1 Protein 4e-10 54
prgI AAX49613.1 PrgI Virulence SPI-1 Protein 3e-10 54
prgI YP_217792.1 cell invasion protein Virulence SPI-1 Protein 4e-10 54
ECs3718 NP_311745.1 EprI Not tested LIM Protein 2e-07 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
prgI YP_005819290.1 Type III secretion needle MxiH like protein VFG0535 Protein 1e-10 54
prgI YP_005819290.1 Type III secretion needle MxiH like protein VFG2466 Protein 9e-10 50
prgI YP_005819290.1 Type III secretion needle MxiH like protein VFG0996 Protein 4e-11 48