Gene Information

Name : prgK (EJP617_27200)
Accession : YP_005819288.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Virulence
Product : Type III secretion system
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2944519 - 2945280 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence : 
ATGACGAGTAAATATCTCCACATACTTTTCGTTTTAATATCGGCCGGATCAATATCTGGCTGTAATAACGAGAAGCTACT
TGAAAATCTTACTCAAGAACAAACTAATCAAGTATTAGCCATTTTACAGCAGCATAATATCTCTGCTCAAAAAAGCGGTG
CTGTAAAAGATGGTTTTGCTATCAGCGTTAGTCAACAAGAAAACACGGCCGCTCTTTCGATTATTAACCAATATCAGCTT
CCTTGGTCAGCAGAAATTCAGATTGCCCAAGCATTTCCGGAAAGCGCTCTTGTCGCCTCACCAAACGCTGAACAGACAAG
GGTCCTTTCTTTACTTGAACAGAGATTAGGCCAGTCACTGCGGATTATCAACCAAGTAGTCAACGCACGCGTACATATCA
GCTATCCTGGTGTCCGAAGTGATAAAGGAAATAAAACTCTATCTCATGTTGGTGTACTCATCTCTTATAAAGGGGAGATA
GATGATAATCTTTTCATCTCTCAAATCAAATCCCTTATAAAGAACAGCCTCAGTGATGTACGTTATGAAAATATTTCAGT
GGTTCTGTTCGATGCACCTGTTATCCAATATTCTACGCCGATGAAAGCATCGAGATCGCGACTGTGGTTCTGGCTTATAC
CTCTAGTAATTTGTACTGTTATAGCGATAGTCACACTTGTTTATCTAATAAATAAGTCACCCGGTCGTTCCATTATCGAG
AACCTTACGCCGACAAAGCCAAATGATAAAAAGGAGTCATAA

Protein sequence : 
MTSKYLHILFVLISAGSISGCNNEKLLENLTQEQTNQVLAILQQHNISAQKSGAVKDGFAISVSQQENTAALSIINQYQL
PWSAEIQIAQAFPESALVASPNAEQTRVLSLLEQRLGQSLRIINQVVNARVHISYPGVRSDKGNKTLSHVGVLISYKGEI
DDNLFISQIKSLIKNSLSDVRYENISVVLFDAPVIQYSTPMKASRSRLWFWLIPLVICTVIAIVTLVYLINKSPGRSIIE
NLTPTKPNDKKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaJ AAS66833.1 YsaJ Not tested SSR-1 Protein 1e-58 51
prgK YP_217790.1 cell invasion protein Virulence SPI-1 Protein 7e-31 43
prgK NP_461792.1 needle complex inner membrane lipoprotein Virulence SPI-1 Protein 7e-31 43
prgK NP_457265.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 6e-31 43
prgK NP_806474.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 6e-31 43
prgK AAS66872.1 PrgK Virulence SSR-2 Protein 1e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
prgK YP_005819288.1 Type III secretion system VFG0533 Protein 3e-31 43
prgK YP_005819288.1 Type III secretion system VFG1787 Protein 3e-32 42