Gene Information

Name : fliP (EJP617_26030)
Accession : YP_005819171.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2839176 - 2839913 bp
Length : 738 bp
Strand : -
Note : -

DNA sequence :
ATGAAACGCCTTATTCCACTGCTGTTACCTGCCCTGTTAATGCTGGCACCCAACGTTTATGCCCAGCTGCCGGGGCTGGT
CAGCCAGCCGACGGCGAACGGCGGGCAAAGCTGGTCGCTGCCGGTGCAGACGCTGGTTTTTATCACCTCGCTCACCTTCC
TTCCCGCGATCCTGCTAATGATGACCAGCTTTACGCGCATCATCATTGTATTTGGCCTGCTGCGTAACGCTCTCGGCACC
CCTTCCGCTCCGCCGAATCAGGTGTTACTCGGTCTGTCACTGTTTCTGACCTTCTTTATTATGGGGCCGGTATTCGACAA
AATGTATACCGATGCCTATCAGCCGTTCAGTGAAGACAAAATCAGCATGCAGGAGGCCATAGATAAGGGTGCGCAACCGC
TGCGCGAGTTTATGCTGCGCCAGACGCGTGAAGCTGACCTCGCCCTGTTTGCCCGGCTGGCCAATACGCCGCCGATTGCA
GGTCCTGAAGCCGTACCCATGCGTATTCTGCTGCCCGCTTATGTGACCAGCGAACTGAAAACCGCTTTTCAGATAGGCTT
CACGGTGTTCATTCCGTTTCTGATTATCGACCTGGTGGTAGCCAGCGTATTAATGGCGCTTGGGATGATGATGGTTCCTC
CGGCCACCATCGCGCTACCCTTCAAACTGATGCTATTTGTCCTGGTCGACGGCTGGCAGCTGCTGGTCAGTTCGCTGGCA
CAAAGCTTTTATTCCTGA

Protein sequence :
MKRLIPLLLPALLMLAPNVYAQLPGLVSQPTANGGQSWSLPVQTLVFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGT
PSAPPNQVLLGLSLFLTFFIMGPVFDKMYTDAYQPFSEDKISMQEAIDKGAQPLREFMLRQTREADLALFARLANTPPIA
GPEAVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVSSLA
QSFYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 9e-28 43
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 9e-28 43
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 9e-28 43
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 5e-31 42
lscR AAO18040.1 LscR Virulence TTSS locus Protein 5e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_005819171.1 flagellar biosynthesis protein FliP VFG2338 Protein 2e-92 88
fliP YP_005819171.1 flagellar biosynthesis protein FliP VFG2494 Protein 5e-75 67
fliP YP_005819171.1 flagellar biosynthesis protein FliP VFG1259 Protein 2e-65 58
fliP YP_005819171.1 flagellar biosynthesis protein FliP VFG2016 Protein 2e-60 55
fliP YP_005819171.1 flagellar biosynthesis protein FliP VFG0188 Protein 5e-33 42
fliP YP_005819171.1 flagellar biosynthesis protein FliP VFG0394 Protein 2e-31 41