Gene Information

Name : kdsB (EJP617_24550)
Accession : YP_005819023.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2687130 - 2687876 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence :
ATGAGTTTTGTTGCCATCATTCCTGCCCGTTTCGCTTCTACCCGCCTGCCGGGAAAACCGCTGGTGGATATTCACGGTAA
GCCGATGGTGGTGCACGTTATGCAACGTGCGCAGGAATCGGGAGCCGAGCGAGTGATTGTGGCGACGGATCATGCTGATG
TGGCGCGTGCGGTGGAGGCAGCCGGTGGCGAAGTCTGTATGACCCGTGTCGATCATCACTCCGGAACTGAGCGTCTGGCA
GAAGTGATCGATCGCTATCAATTCCCGGACGACAAGGTGATCGTTAACGTTCAGGGCGATGAGCCGATGATCCCGCCGGT
GATTATCCGTCAGGTCGCAGAAAACCTCGCGCAGCGCAGCGTAGGAATGGCAACGCTGGCGGTGCATGTAGACTCTGTGG
AAGAAGCGTTTAACCCCAATGCGGTGAAAGTGGTGCGCGATGCCCATGGTAACGCGCTGTACTTTTCCCGCGCCACCATC
CCCTGGGATCGCGAGCGCTTTGCTGTATCACATGACAATATTGGCGACCACTTCCTGCGCCATATTGGTATCTACGGCTA
CCGCGCCGGTTTTATCCGCCGCTACGTGCGTTGGCAAGCCAGCCCGCTGGAGCAGATCGAGCTGCTGGAACAGTTACGCG
TACTGTGGTATGGCGAAAAAATTCACGTTGATGTGGCACAAGCGGTTCCCAGCGCAGGGGTGGATACGGCAGAAGATCTG
TCACGCGTGCGCGCAGCCATGCAGTAA

Protein sequence :
MSFVAIIPARFASTRLPGKPLVDIHGKPMVVHVMQRAQESGAERVIVATDHADVARAVEAAGGEVCMTRVDHHSGTERLA
EVIDRYQFPDDKVIVNVQGDEPMIPPVIIRQVAENLAQRSVGMATLAVHVDSVEEAFNPNAVKVVRDAHGNALYFSRATI
PWDRERFAVSHDNIGDHFLRHIGIYGYRAGFIRRYVRWQASPLEQIELLEQLRVLWYGEKIHVDVAQAVPSAGVDTAEDL
SRVRAAMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-34 44
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 3e-34 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 6e-34 44