Gene Information

Name : EJP617_00250 (EJP617_00250)
Accession : YP_005816593.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 31034 - 31336 bp
Length : 303 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAGAAGAAATTTTAGTCCTGAATTCCAACGCGAATCCGCTCAGTTGGTTGTTAATCAAAACTACACCGTCTCTGA
TGCCGCTAAGGCTATGGATGTCGGTCTTTCCACGATGACAAAATGGGTCAAGCAACTGCGTGATGAGCGGCAGGGAAAAA
CACCAAAAGCCTCTCCGATAACACCGGAACAAATCGAAATACGTGAGCTGAAGAAAAAGCTACAACGCGTTGAAATGGAA
AGGGATATATTAAAAAAGGCTACCGCGCTCTTGATGTCAGACTCCCTGAACGGTTCTCGATAA

Protein sequence :
MKRRNFSPEFQRESAQLVVNQNYTVSDAAKAMDVGLSTMTKWVKQLRDERQGKTPKASPITPEQIEIRELKKKLQRVEME
RDILKKATALLMSDSLNGSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7045 CAD33744.1 - Not tested PAI I 536 Protein 6e-39 88
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 6e-39 88
api80 CAF28554.1 putative transposase Not tested YAPI Protein 3e-33 88
insN YP_002152325.1 transposase for insertion sequence element IS911 Not tested Not named Protein 4e-38 87
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 7e-31 76
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 7e-31 76
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 7e-31 76
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 7e-31 76
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 7e-31 76
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 7e-31 76
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 1e-30 76
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 1e-30 76
unnamed CAD42034.1 hypothetical protein Not tested PAI II 536 Protein 8e-28 64
ECO111_3778 YP_003236113.1 putative IS602 transposase OrfA Not tested LEE Protein 8e-25 61
aec66 AAW51749.1 Aec66 Not tested AGI-3 Protein 5e-25 61
unnamed ACU09431.1 IS911 transposase orfA Not tested LEE Protein 2e-23 59
Z5088 NP_290240.1 hypothetical protein Not tested LEE Protein 2e-23 59
ECs4535 NP_312562.1 hypothetical protein Not tested LEE Protein 2e-23 59
unnamed AAC31483.1 L0004 Not tested LEE Protein 2e-23 59
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 5e-22 55
trp1329A CAB46577.1 IS1329 transposase A Not tested HPI Protein 2e-19 44
unnamed CAD42047.1 hypothetical protein Not tested PAI II 536 Protein 4e-13 43
tnpA CAB61575.1 transposase A Not tested HPI Protein 8e-19 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EJP617_00250 YP_005816593.1 transposase VFG1485 Protein 3e-39 88
EJP617_00250 YP_005816593.1 transposase VFG1123 Protein 3e-31 76
EJP617_00250 YP_005816593.1 transposase VFG1553 Protein 3e-28 64
EJP617_00250 YP_005816593.1 transposase VFG0784 Protein 6e-24 59
EJP617_00250 YP_005816593.1 transposase VFG1566 Protein 2e-13 43