Gene Information

Name : ribD (EJP617_20860)
Accession : YP_005818654.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Unknown
Product : Riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2299684 - 2300787 bp
Length : 1104 bp
Strand : +
Note : -

DNA sequence :
ATGCGCGATGAAATTTATATGGCCCGGGCGCTGGAACTGGCGCGCCGTGGCCGTTTTACCACCACGCCGAATCCTAATGT
AGGATGCGTACTGGTGCGTGATGGCCAGATCGTCGGTGAAGGCTACCATATGCGCGCCGGCGAGCCGCACGCGGAAGTAC
ACGCGCTACGCATGGCTGGTGAGAAATCGCTCGGGGCTACCGCCTATGTCACGCTGGAGCCGTGTAGCCATCACGGGCGT
ACGCCGCCGTGCTGTGAGGCGCTGATTGCCGCTGGCATTAAGCGGGTCGTTACCGCGATGCAGGATCCGAACCCGCAGGT
AGCCGGGCGCGGGCTATATCGTTTGCAGCAGGCAGGAATTGAAGTCAGCCACGGGCTGATGATGCAGGAAGCGGAAGCGC
TGAATCGTGGCTTTCTCAAACGCATGCGCACCGGTTTCCCCTGGGTACAGCTTAAGCTCGGTGCCTCCCTGGATGGGCGC
ACGGCGATGGCCAGCGGGGAAAGCCAGTGGATCACCTCTCCTGAAGCAAGACGCGATGTGCAAAGACTGCGCGCGCAAAG
CTCGGCTATCCTCAGCACCAGCGCCACCGTGCTGGCAGATAATCCGGCGTTAACCGTTCGTCACGATGAACTGGATAGCG
CCAGTCTGGCGGACTATCCGGTCGATTTGCTGCGCCAGCCGGTGCGCGTCATCGTTGACGCTCAGAATCGCGTGACTCCA
GAGTACCGGCTAATTGCCCAGCCGGGGGAGACCTGGCTGGCACGCTCCTCCGGCGATCGGCAGCAGTGGCCGGAAAACGT
TAGCCAGCTGATCGTACCGCTCTATCAGAATCGCCTCGATCTGGTCTCATTACTGATGCTGCTGGGCAAAAAACAGATTA
ACAGCGTTTGGGTGGAAGCCGGAGCGCAATTTGCCGGCGCATTATTACAGGCAGGCGTCGTCGATGAACTGATCGTCTAT
CTGGCTCCTAAATTACTTGGCGATGCCGGGCGTGGCCTGTGTCAGCTGCCGGGGCTGGAAACGCTGGCCGCTGCGCCTGC
CTTTACCTTTAGTGATATTCGTCAGGTGGGGCCAGATATCAGGCTCACGTTGACCCCGTCATAA

Protein sequence :
MRDEIYMARALELARRGRFTTTPNPNVGCVLVRDGQIVGEGYHMRAGEPHAEVHALRMAGEKSLGATAYVTLEPCSHHGR
TPPCCEALIAAGIKRVVTAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMQEAEALNRGFLKRMRTGFPWVQLKLGASLDGR
TAMASGESQWITSPEARRDVQRLRAQSSAILSTSATVLADNPALTVRHDELDSASLADYPVDLLRQPVRVIVDAQNRVTP
EYRLIAQPGETWLARSSGDRQQWPENVSQLIVPLYQNRLDLVSLLMLLGKKQINSVWVEAGAQFAGALLQAGVVDELIVY
LAPKLLGDAGRGLCQLPGLETLAAAPAFTFSDIRQVGPDIRLTLTPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-60 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-60 48