Gene Information

Name : xerD (EJP617_18060)
Accession : YP_005818374.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1979552 - 1980445 bp
Length : 894 bp
Strand : +
Note : -

DNA sequence :
GTGCAGGATAACGATCTGATTGAGCAATTTCTTGATGCCCTGTGGATCGAGCGCAATCTGGCGCAAAATACCGTGGATTC
TTATCGCCTCGATCTGCGCTCACTCGGTGACTGGCTGGCGCACCAGCAGCTGTCGCTGTTGAACGTTGAGGTGTTCAATC
TGCAGGAGTTCCTGGCGCAGCGCCTGGAGGGTGGCTATAAAGCCACCAGTTCTGCGCGCCTGCTTAGCGCCATGCGCCGT
CTGTTTCAGTACCTCTATCGGGAAAAGCTGCGTGAAGACGACCCCAGCGCGCTGCTTTCCTCACCCAAGCTGCCGCAGCG
GCTGCCGAAGGATCTGTCGGAAGCCCAGGTAGAAAGATTATTACAGGCACCATGCCTGGAACAGCCGATTGAACTGCGTG
ATAAGGCGATGCTGGAACTGTTGTACGCCACCGGTCTGCGCGTGACGGAACTGGTCGGTCTGACCCTGAGTGATATCAGT
CTGCGTCAGGGGGTGGTACGGGTGATCGGTAAAGGAAATAAAGAACGCCTGGTGCCGATGGGCGAAGAGGCGGTGCACTG
GATCGAGCAGTATATTGAGTATGGCCGCCCGTGGCTGCTTAATGGACAGACGATTGACGTGTTGTTCCCCAGTAACCGCG
CGAAACAAATGACGCGTCAAACCTTCTGGCATCGCATCAAACATTACGCCACACTGGCGGGTATCGACAGCGACAAACTG
TCACCCCACGTTCTGCGCCATGCTTTTGCAACCCATTTGTTGAACCACGGGGCAGATTTACGTGTCGTACAGATGTTATT
AGGTCACAGCGATTTATCAACGACACAGATTTATACCCATGTAGCGACAGAGCGCCTGCGACAGCTGCATCAGCAGCACC
ATCCACGCGCCTGA

Protein sequence :
MQDNDLIEQFLDALWIERNLAQNTVDSYRLDLRSLGDWLAHQQLSLLNVEVFNLQEFLAQRLEGGYKATSSARLLSAMRR
LFQYLYREKLREDDPSALLSSPKLPQRLPKDLSEAQVERLLQAPCLEQPIELRDKAMLELLYATGLRVTELVGLTLSDIS
LRQGVVRVIGKGNKERLVPMGEEAVHWIEQYIEYGRPWLLNGQTIDVLFPSNRAKQMTRQTFWHRIKHYATLAGIDSDKL
SPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-58 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-58 56