Name : hrpL (EJP617_16950) Accession : YP_005818263.1 Strain : Erwinia sp. Ejp617 Genome accession: NC_017445 Putative virulence/resistance : Virulence Product : hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-sigma factor Function : - COG functional category : - COG ID : - EC number : - Position : 1875812 - 1876360 bp Length : 549 bp Strand : + Note : - DNA sequence : ATGACAGAAATTCACCTGCAGTCAACAGAACCCACATCGGTCAACGAAGGGCTACCGCTGAATATTGATTGGGAAGGTAT CTTTCGTGAGCATGGGCGACGCGTGCATCATTTTATTCGCAAGCGCGTTTCCCATCGCGAAGATGCCGAGGATCTGGAGC AAATGACCTGGCTGGAAGTTTTGCGTAACCGTGACAAATTCGCCGGTGCGTCGCGGCCAGAAACCTGGGTGTTTGGTATT GCCTTAAATTTAGTGCGCAACCATTTTCGCCTGCAGTCCGGACGGCCGCGTTGTGATGAGCTGGACGACGATATCATTCT GACTCAGGGCGACGATCCAAGCCATATCACCGAATATCAGCGCCTGCTGAACTCGACGCTTAATTCCATTGCCGTATTGC CGGAAGATGCCCGCCGTCTGATGAACATGCTGGTCGAGAAAGACGGCAGCTATCAGGATATCGCAGCACATTTAAATATC CCGATTGGCACCGTGCGTTCACGTCTGTCGCGCGCGCGCGTCACGCTGAAGCAGTCAGTATTTTCTTAA Protein sequence : MTEIHLQSTEPTSVNEGLPLNIDWEGIFREHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFGI ALNLVRNHFRLQSGRPRCDELDDDIILTQGDDPSHITEYQRLLNSTLNSIAVLPEDARRLMNMLVEKDGSYQDIAAHLNI PIGTVRSRLSRARVTLKQSVFS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
hrpL | AAD24681.1 | sigma factor HrpL | Virulence | Hrp PAI | Protein | 1e-80 | 96 |
hrpL | ABA47271.1 | HrpL | Virulence | S-PAI | Protein | 2e-35 | 51 |
hrpL | AAT96335.1 | HrpL | Virulence | S-PAI | Protein | 2e-31 | 49 |
hrpL | AAT96295.1 | HrpL | Virulence | S-PAI | Protein | 1e-31 | 49 |
hrpL | AAT96254.1 | HrpL | Virulence | S-PAI | Protein | 1e-31 | 49 |
hrpL | AAG33875.2 | HrpL | Virulence | Hrp PAI | Protein | 7e-24 | 44 |
hrpL | NP_791231.1 | RNA polymerase sigma factor HrpL | Virulence | Hrp PAI | Protein | 1e-24 | 44 |
hrpL | AAT96137.1 | HrpL | Virulence | T-PAI | Protein | 1e-24 | 43 |
hrpL | AAT96191.1 | HrpL | Virulence | T-PAI | Protein | 1e-24 | 43 |
hrpL | ABQ88350.1 | HrpL | Virulence | Hrp PAI | Protein | 8e-24 | 43 |
hrpL | AAA17652.1 | putative alternate sigma factor | Virulence | Hrp PAI | Protein | 8e-24 | 43 |