Gene Information

Name : EJP617_15570 (EJP617_15570)
Accession : YP_005818125.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1739470 - 1740276 bp
Length : 807 bp
Strand : +
Note : -

DNA sequence :
GTGGCCACTCTCTCCCATGTGTTTGGGGTTCATCGCAGCAGCTATAAATACTGGAAAAATCGTCCTGAAAAACCAGACGG
CAGACGGGCTGTGTTACGAAGTCAGGTACTTGAGCTACATGGCATCAGCCACGGTTCGGCCGGAGCAAGAAGCATCGCCA
CAATGGCAACCCAGAGAGGCTATCAGATGGGGCGCTGGCTTGCTGGCCGGCTCATGAAAGAACTGGGGCTGGTCAGTTGC
CAGCAGCCGACTCACCGGTATAAGCGTGGCGGTCATGAACACGTTGCTATCCCGAATCACCTTGAGCGACAGGTCGCCGT
AACAGAGCCAAACCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACAGGCAAACGCCGGGCATACCTCGCTGTTGTTC
TCGACCTGTTTGCAAGAAAGCCAGTGGGCTGGGCAATGTCGTTCTCGCCGGACAGTAGACTCACCATGAAAGCACTGGAA
ATGGCATGGGAAACTCGCGGTAAGCCCGCAGGAGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTT
CCGGCAGTTACTGTGGCGCTACCGGATCAGGCAGAGTATGAGCCGGCGTGGAAACTGTTGGGATAACAGCCCAATGGAAC
GCTTCTTTCGGAGTCTGAAAAACGAATGGGTGCCAGTGACAGGTTACGTAAGCTTCAGCGATGCGACTCACGCCATAACG
GACTACATCGTTAGATATTACAGCGCACTCAGGCCGCACGAATATAATGGTGGGTTGCCACCAAACGAATCAGAAAATCG
ATACTGA

Protein sequence :
MATLSHVFGVHRSSYKYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATQRGYQMGRWLAGRLMKELGLVSC
QQPTHRYKRGGHEHVAIPNHLERQVAVTEPNQVWCGDVTYIWTGKRRAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPAGVMFHSDQGSHYTSRQFRQLLWRYRIRQSMSRRGNCWDNSPMERFFRSLKNEWVPVTGYVSFSDATHAIT
DYIVRYYSALRPHEYNGGLPPNESENRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 4e-93 90
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 4e-93 90
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-87 65
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 3e-87 65
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-87 65
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-87 65
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-87 65
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-87 65
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-87 65
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 3e-87 65
unnamed AAC31485.1 L0006 Not tested LEE Protein 6e-65 64
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 8e-65 64
unnamed CAI43898.1 putative transposase Not tested LEE Protein 1e-65 63
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 1e-65 63
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 3e-66 63
Z5089 NP_290241.1 transposase Not tested LEE Protein 4e-66 63
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 1e-68 63
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 1e-61 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EJP617_15570 YP_005818125.1 transposase VFG1484 Protein 2e-93 90
EJP617_15570 YP_005818125.1 transposase VFG1122 Protein 1e-87 65
EJP617_15570 YP_005818125.1 transposase VFG0785 Protein 2e-66 63