Gene Information

Name : thiC (EJP617_13560)
Accession : YP_005817924.1
Strain : Erwinia sp. Ejp617
Genome accession: NC_017445
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1496157 - 1498091 bp
Length : 1935 bp
Strand : -
Note : -

DNA sequence :
ATGTCTATCGTTGAAAAAAAACCCACCCGCCGTGAACAACGCGCCCAGGCGCAGAAGTTTATCGACTCCTTACAAGGTAG
CGCTTTTCCCAACTCAAAACGCATCTGGCTCACCGGATCGCAGCCCGATATTCGCGTACCGATGCGCGAAATCCAGCTTA
GCCCCACCGTAACGGGTGGCCGCAAAGATAATCCAACGCTGGTCGAAAATGAGCCGGTGCCGGTCTATGACACCGCCGGT
CCCTATGGTGACCCGGAAGCCAGCATTGATGTTCATGCCGGACTGGCCAAACTGCGTCGTGACTGGATTGTCAAACGCGA
TGATACCGAACAGATCGCCGAACTGAGTTCCGCCTATACCCAGGAACGCCTTGCCGATGAAGGGCTGGATCACCTGCGTT
TCGACAACCTTCCGCGCCCACGCAGCGCCCGTGCCGGGCGCTGCGTGACTCAGATGCACTACGCGCGTCTTGGGGTGATT
ACGCCGGAAATGGAATTTATTGCCATCCGCGAGAATATGGGGCGCGAGCGCATTCGCGGCGAAGTGCTGTTACAACAGCA
CCCGGGTAACAGCTTTGGTGCCAGCCTGCCGGAAAATATTACCCCCGAATTTGTCCGCCAGGAAGTCGCAGAAGGACGCG
CCATTATTCCCGCCAATATCAACCACCCGGAATCGGAACCGATGATTATTGGCCGTAACTTCCTGGTGAAAATCAATGCG
AATATCGGCAACTCGGCGGTCAGCTCCTCTATCGAAGAAGAGGTGGAGAAGCTGGTATGGTCGGCGCGCTGGGGCGCAGA
TACGGTGATGGACCTGTCAACCGGGCGTTATATTCATGAAACACGCGAGTGGATCCTGCGTAACAGCCCGGTTCCCATTG
GCACAGTACCAATCTATCAGGCGCTGGAGAAAGTGAACGGCATAGCAGAGGATCTCAACTGGGAGATCTTCCGCGATACC
TTGCTGGAACAGGCTGAACAGGGCGTCGACTACTTCACCATCCATGCCGGCGTGCTGCTGCGCTATGTGCCGATGACCGC
CAAACGGCTGACCGGCATTGTTTCACGCGGCGGATCGATCATGGCGAAATGGTGTCTGTCGCATCATCAGGAAAGTTTTC
TCTATCTGCATTTCCGTGAAATCTGCGAAATCTGCGCCGCTTATGACGTATCCCTGTCGCTCGGCGACGGTCTGCGCCCT
GGCTCGATTCAGGATGCTAACGATGAGGCCCAGTTCGCCGAGCTGCGCACCTTGGGTGAACTGACCAAAATCGCCTGGGA
ATACGATGTGCAGGTGATGATTGAAGGCCCGGGTCATGTACCCATGCAGATGATCCGCACCAATATGACGGAACAGCTGC
AACACTGCCACGAAGCGCCCTTCTATACGCTCGGCCCGCTGACCACTGATATCGCACCGGGTTACGACCATTTTACCTCC
GGGATTGGTGCTGCAATGATTGGCTGGTTTGGCTGCGCCATGCTGTGCTACGTCACACCCAAAGAACATCTTGGCCTGCC
GAACAAAGAGGATGTTAAGCAGGGACTGATTACCTACAAAATCGCTGCCCACGCCGCCGACCTGGCCAAAGGCCATCCCG
GCGCGCAGATCCGCGACAACGCCATGTCAAAAGCGCGCTTTGAATTCCGCTGGGAAGACCAGTTTAATCTTGCCCTTGAC
CCGCATACTGCCCGCGCTTATCACGATGAAACCCTGCCCCAGGAATCGGGCAAGGTGGCGCACTTCTGTTCGATGTGCGG
ACCGAAGTTCTGTTCAATGAAAATTACCCAGGAAGTGCGGGAATACGCCGCACGACAGGAGGCGGAAGCAAAGCCGGTCG
AGATTGGCATGGCACAGATGTCGCATGAATTCCGCCGTCGGGGAGGCGAGCTTTATCACCGCGCCGATAGCCTGAAGCCG
GAGGAAAAAGTATGA

Protein sequence :
MSIVEKKPTRREQRAQAQKFIDSLQGSAFPNSKRIWLTGSQPDIRVPMREIQLSPTVTGGRKDNPTLVENEPVPVYDTAG
PYGDPEASIDVHAGLAKLRRDWIVKRDDTEQIAELSSAYTQERLADEGLDHLRFDNLPRPRSARAGRCVTQMHYARLGVI
TPEMEFIAIRENMGRERIRGEVLLQQHPGNSFGASLPENITPEFVRQEVAEGRAIIPANINHPESEPMIIGRNFLVKINA
NIGNSAVSSSIEEEVEKLVWSARWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGIAEDLNWEIFRDT
LLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQESFLYLHFREICEICAAYDVSLSLGDGLRP
GSIQDANDEAQFAELRTLGELTKIAWEYDVQVMIEGPGHVPMQMIRTNMTEQLQHCHEAPFYTLGPLTTDIAPGYDHFTS
GIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALD
PHTARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVREYAARQEAEAKPVEIGMAQMSHEFRRRGGELYHRADSLKP
EEKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 72
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 72
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 70