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Name : gspE (SW2_5811) Accession : YP_005816207.1 Strain : Chlamydia trachomatis Sweden2 Genome accession: NC_017441 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 641317 - 642822 bp Length : 1506 bp Strand : - Note : - DNA sequence : ATGATGGACGGGAATAAAGGCACTATGCAAGATCTGTTAGATCGGCTTCCCTACTCTTTTTTAAAGAAAAATTATTTGCT GCCTGTAGAGGATTTAGGCGACAAGATCGTTTTTGCAAGGCATTTGAAAAAAACTCCTTTGGAGGCTTTGGATGAGGTGC GGTTGATCACGCAAAAACCTCTTTCATTGGTTTCTAAGGAAGAAGCAGAAATTATTCATGGATTGCAAAAGCTATATAGC GATAAGGACGGGAAAGCTTCCGAGATGCTACAGTCTATGCAGGAAGCTGTAGTGCCTGAATCGGAAATTGATACCACAGA ACTTCTTGAGAATCAAGAGAACAGTGCTCCTGTAGTGCGGTTACTCAATCTGATTCTTAAGGAAGCTATTGAAGAGCGAG CCTCGGATATTCATTTTGACCCTGTGGAAGATCTTTTACGTATTCGTTACCGCATAGACGGTGTTCTACACGATCGCCAC GCTCCCCCGAACCATTTACGAGCCGCTCTTATTACTCGTATTAAAGTGCTTACCAAACTCGATATCGCCGAACACCGACT GCCTCAAGATGGTCGCATTAAGTTGCAACTAGGAGGACAAGAGATCGATATGCGTGTCAGTACGGTCCCTGTCATTCATG GAGAGCGGGTAGTGTTGCGCATACTGGATAAGCGCAATGTAATTTTAGATGTACGCGGCTTGTGTATGCCTCCTAAAATG GAGACCTCCTTTAGAAAAGCGATAGGAGTTCCGGAAGGGATTCTATTAGTAACAGGTCCGACAGGAAGTGGGAAGACGAC CACTTTATATAGTGTCATACAACACCTTTCAGGTCCTTTTACTAATATCATGACCATAGAAGATCCTCCAGAGTATAAAC TCCCTGGTGTCGCTCAAATTGCTGTGAAACCTAAAATAGGACTAACCTTTTCTAAAGGACTTCGCCATTTGTTAAGACAA GATCCAGACGTTTTGATGGTAGGAGAAATCCGGGATCAAGAGACTGCGGAGATTGCCATTCAAGCGGCATTGACGGGGCA CTTGGTAGTGTCTACTCTTCATACGAATGATGCTGTTTCTGCAATCCCGCGTCTTTTAGACATGGGAGTAGAGCCTTATT TATTATCCGCAACAATGATAGGGGCTGTCGCTCAACGACTCGTCCGTAGAATTTGTACGCATTGCAAAGAATTCTGTGTG GCCGATGTGCAAGAACAGGCTTTATTAAGAGCTCTAGGGAAGGATCCTTTCGCTCCTTTATGTAAAGGACGCGGATGTTC ACAGTGCTTCCGTTCCGGATACAAAGGAAGACAAGGGATCTATGAGTTTGTCGATGTAACCACAACACTCCGTTCTGAAA TTGCTTTAGGGAGACCTTACCACATTTTACGAGGTGTTGCGGAGCGAGAAGGGTATTGCCCTCTGCTAGAGCATGGAGTA GAACTGGCTCTTGCTGGGGAGACAACCCTTTCCGAAGTTTTGCGTGTGGCAAAACGGTCAGAATAG Protein sequence : MMDGNKGTMQDLLDRLPYSFLKKNYLLPVEDLGDKIVFARHLKKTPLEALDEVRLITQKPLSLVSKEEAEIIHGLQKLYS DKDGKASEMLQSMQEAVVPESEIDTTELLENQENSAPVVRLLNLILKEAIEERASDIHFDPVEDLLRIRYRIDGVLHDRH APPNHLRAALITRIKVLTKLDIAEHRLPQDGRIKLQLGGQEIDMRVSTVPVIHGERVVLRILDKRNVILDVRGLCMPPKM ETSFRKAIGVPEGILLVTGPTGSGKTTTLYSVIQHLSGPFTNIMTIEDPPEYKLPGVAQIAVKPKIGLTFSKGLRHLLRQ DPDVLMVGEIRDQETAEIAIQAALTGHLVVSTLHTNDAVSAIPRLLDMGVEPYLLSATMIGAVAQRLVRRICTHCKEFCV ADVQEQALLRALGKDPFAPLCKGRGCSQCFRSGYKGRQGIYEFVDVTTTLRSEIALGRPYHILRGVAEREGYCPLLEHGV ELALAGETTLSEVLRVAKRSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-94 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-95 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_005816207.1 | general secretion pathway protein E | VFG0182 | Protein | 3e-93 | 48 |
| gspE | YP_005816207.1 | general secretion pathway protein E | VFG1876 | Protein | 4e-97 | 46 |
| gspE | YP_005816207.1 | general secretion pathway protein E | VFG2048 | Protein | 3e-95 | 45 |
| gspE | YP_005816207.1 | general secretion pathway protein E | VFG1880 | Protein | 3e-76 | 44 |
| gspE | YP_005816207.1 | general secretion pathway protein E | VFG0233 | Protein | 8e-70 | 44 |
| gspE | YP_005816207.1 | general secretion pathway protein E | VFG0112 | Protein | 1e-76 | 41 |
