Gene Information

Name : argF (BbuN40_0842)
Accession : YP_005807018.1
Strain : Borrelia burgdorferi N40
Genome accession: NC_017418
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.1.3.3
Position : 899387 - 900370 bp
Length : 984 bp
Strand : +
Note : identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658

DNA sequence :
ATGTATAATTTACGAAATAGGAGCTTTTTAAATCTTTTAGATTTTACAAGCAAAGATATTAAATATTTACTTGATTTATC
GATTGATTTAAAAAAGTCAAAATATGCAGGAATTGAAGTGCAAAAACTTAAAGGTAAAAATATAGTTATAATTTTCGAGA
AAGATTCAACAAGGACCCGGTGTGCTTTTGAGATCGCAGCCTATGATCAAGGGGCAAATATTACTTATTTAGGATCTAAG
GGTAATCAAATGGGCTCAAAAGAGTCTATGATAGATACCGCTAGAGTTTTGGGACGCATGTATGATGCTATTGGATTTAG
AGGCTTTTCTCAACAGACTGTTGAATGTTTGGCGAATTATTCTAATGTTCCTGTTTACAATGGATTGACAGATATTTCTC
ACCCAACCCAAATACTAGCCGATTTAATGACAATAAAAGAACATAAGGGGAGTTTGAAAGGGATTAAAATAGTGTTTTGT
GGCGATGGTAGGGGGAATGTTGCTAATTCTTTATTGAAAGGCTGTGCTATTATGGGGCTTGATTTTAGAATTTTTGCTCC
CAAAGAGCTTTTTCCAGACCCCGATTTGATGCTTAAGGCTAGGTCTTTAGCCCTAGAGAGTGGGGGTAAAATTACAATTA
CAGATTCTAAAGAAGAGGCTGTTAAATGTGCTGATGTTGTGTATACAGACGTGTGGGTATCTATGGGGGAGAGTAATTGG
GAAGATAGAATAAATCTTCTAAAGCCTTATCAGGTTAATAAAGAGATAATGTGCATGGCAAAAGATGATGCAATATTTAT
GCATTGCTTGCCTGCTTTTCATGACTTAAACACTGTGATTGGTAAGGATATTTTTGATAAATACGGACTTGATGGAATTG
AAGTTACAGAAGAAATTTTTGAAAGTAAAAATTCAGTTGTTTTTGATGTGGCTGAAAATAGGGTGCATACCATTAAAGCT
ATTATGGTATCAACTTTGGAATAA

Protein sequence :
MYNLRNRSFLNLLDFTSKDIKYLLDLSIDLKKSKYAGIEVQKLKGKNIVIIFEKDSTRTRCAFEIAAYDQGANITYLGSK
GNQMGSKESMIDTARVLGRMYDAIGFRGFSQQTVECLANYSNVPVYNGLTDISHPTQILADLMTIKEHKGSLKGIKIVFC
GDGRGNVANSLLKGCAIMGLDFRIFAPKELFPDPDLMLKARSLALESGGKITITDSKEEAVKCADVVYTDVWVSMGESNW
EDRINLLKPYQVNKEIMCMAKDDAIFMHCLPAFHDLNTVIGKDIFDKYGLDGIEVTEEIFESKNSVVFDVAENRVHTIKA
IMVSTLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 3e-87 62
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-87 61
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-87 61
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-87 61
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 9e-88 61
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 9e-88 61
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-87 61