Gene Information

Name : hslU (BbuN40_0295)
Accession : YP_005806493.1
Strain : Borrelia burgdorferi N40
Genome accession: NC_017418
Putative virulence/resistance : Unknown
Product : heat shock protein HslVU, ATPase subunit HslU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 302598 - 303944 bp
Length : 1347 bp
Strand : -
Note : identified by match to protein family HMM PF07724; match to protein family HMM TIGR00390

DNA sequence :
ATGAATAAATTAGAAGAGCACTATATAGTTCCCAAAGATGTAGTTGCAGAACTTGATAAATATATAATAGGTCAAGACGA
AGCTAAAAAATTAGTATCAATTGCTCTTGTTAATAGATATATAAGGTCTAGGCTTCCAAAAGAAATAAAAGATGAGGTAA
TGCCTAAAAACATTATTATGATTGGATCAACTGGCATTGGGAAGACCGAGATTGCAAGAAGACTTTCTAAATTAATTAAA
GCTCCTTTTATTAAAGTTGAGGCTACAAAATATACTGAGGTTGGTTATGTTGGTCGTGATGTTGAATCTATGGTTAGAGA
TTTAATGAGCATTGCAGTCAATATGGTAAAAGAAGAGATGTATAGTACTGTAAGAGATGATGCTTTAGTAAGAACAGAGG
AGAGAATAGTTGATAGTCTTTTTAAGGGATCTAGTAATTCTGAGAATATGGATCCAAATGAAATAAAGGCGGAAGAAAAG
GTAAAAGAGAAGCTTAGAAAAAAGCTTAGAGCAGGTGAGCTTGATGATACTACTATTGAAATACAAATTTCTAGTAAAAT
GCCATTTTCTACAATAGAAATATTTACGGGTGGTAATTTTGAAGAGATTGATATGGGAATTGGCGGTTTGCTGGGTAATA
TATTTGATAGAAAAAAGAAAAGAGAATTGAAGATTAAAAAAGCAAAGGAAATAATATTAGCAGAAGAGCTTGAGAAATTG
GTCGATCACGAAAACATTTCAGATATTGCAAAATCTAAAGTTGAAAATATGGGAATTATTTTTATTGATGAGATCGATAA
AATAGCTGCTAAGAATAGGAGTGGCAATGATGTGTCCAGAGAAGGTGTTCAAAGAGATATTTTGCCAATTATTGAAGGTT
CTAAAGTTAATACAAAATATGGAATAGTTGATACTTCTCATATTTTATTTATTGCAGCAGGAGCATTTAATTTGGCTAAA
CCTTCCGATTTAATACCCGAGCTTCAAGGAAGATTTCCTATTAAGGTTGAACTTAAGAGCTTAAGCATAGACGATTTGAA
AAAAATTTTAAAACAAACAAAAAATTCTTTAATAAAACAATATGTTGCGATGTTTAAGGTTTATGATTTAGATTTGAAGT
TTAGTGAGGAAGCTATAGATAGAATCGCAGAGCTTACTTTTAATATGAATCTTGAGAGTGAAAATCTTGGTGCCAGAAGA
CTTCACGGTGTTATGGAAATAGTGCTTGCAGATCTTTTTTTTGAAGTGCCTGGCAGTAAGTTGAAAAAATTTGAAATAAA
CTTGGACTATGTTAATAAAAAAATACAAATTAACGAACAAAAAGATTTGAATTATTATATAATTTAG

Protein sequence :
MNKLEEHYIVPKDVVAELDKYIIGQDEAKKLVSIALVNRYIRSRLPKEIKDEVMPKNIIMIGSTGIGKTEIARRLSKLIK
APFIKVEATKYTEVGYVGRDVESMVRDLMSIAVNMVKEEMYSTVRDDALVRTEERIVDSLFKGSSNSENMDPNEIKAEEK
VKEKLRKKLRAGELDDTTIEIQISSKMPFSTIEIFTGGNFEEIDMGIGGLLGNIFDRKKKRELKIKKAKEIILAEELEKL
VDHENISDIAKSKVENMGIIFIDEIDKIAAKNRSGNDVSREGVQRDILPIIEGSKVNTKYGIVDTSHILFIAAGAFNLAK
PSDLIPELQGRFPIKVELKSLSIDDLKKILKQTKNSLIKQYVAMFKVYDLDLKFSEEAIDRIAELTFNMNLESENLGARR
LHGVMEIVLADLFFEVPGSKLKKFEINLDYVNKKIQINEQKDLNYYII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 5e-73 47