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Name : fliI (BbuJD1_0288) Accession : YP_005805395.1 Strain : Borrelia burgdorferi JD1 Genome accession: NC_017403 Putative virulence/resistance : Virulence Product : flagellar protein export ATPase FliI Function : - COG functional category : - COG ID : - EC number : 3.6.3.14 Position : 297177 - 298487 bp Length : 1311 bp Strand : - Note : identified by match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02545; match to protein family HMM TIGR03498 DNA sequence : GTGAGCAATTTTTTTGAAAATTATTTAAGACAAGTAGATGATATTGAAACTGTTTCTTTTGTTGGCAGGGTGCAAAAAAT AAAAGGTCTTTTAGTTGAGAGTTTAGGGCCTCAGTGCGCTATTGGAGATTTGTGTTTAATTGATCAAAGAAATGGCAAAA AGGTATGCGCAGAGGTTTTAGGATTTAATGGTCCTTATGTTAGCCTTATGGCCTATGAAGGATTTAGCGGGATTGAAGTT GGAAATAAAGTTTATTCTTTAAACAAAGGGCTAGAAATAAATCTTAGTGATGAGCTTTTGGGAAGAGTTATTGATTCTCT TGGCAGACCTATTGATAATAAAGGGTCATTTTTGAATAATAGTTATAAAGAGTTAATTTTTGAAAAAATTAATCCAATTA ATAGAAGTATTTTTGAAGATCAAATATTAACGGGAGTTAAAGTTCTTGATGGGTTTTTGCCAGTTGCAAAAGGACAAAGA GTTGGTATTTTTTCTGGTTCTGGTGTTGGTAAATCTACTTTGCTTGGCATGATTGCAAAAAATTCAAATGCAGATGTAAA CGTTATTGCTTTTATTGGGGAAAGGGGTCGAGAGCTTAATGAGTTTATTGAGCATGAGCTTGGTGAAGAGCGTTTAAAAA AAAGTGTTTTAGTTGTTTCAACTTCTGATGAATCTCCCATTTCAAGGTATAAGGGAGCTTATGTTGCTACCATGATAGCA GAATACTTTAGGGAGCAAGGTAAAGATGTGGCTTTGCTTTTTGATTCTATTACTAGGTTTGCAAATGCTAAAAGAGAGAT GTCTCTTTCTTTAGGAGAGCCTCCGGTAGCTAAAGGTTATCCGCCTTCTGTTTTTGTTGAAATTCCAATTTTGCTTGAGA GATCGGGCTTTAATGGTAATGGGGGAAGTGTTACTGGGTTTTATACTGTTCTTGTTGAGGGGGATGATTTCACAGAGCCT GTAGCCGATAATATTAAAGCTGTTTTGGATGGTCATATTATTTTAGACAGAGATTTGTTTGACAGGGGAATATATCCTTC AATAAATGTTTTAAGTTCAACTTCAAGATCTATTCATAGAATAATGAGCCTAGAAAAACAAAAATTAATAATGAAAGCTA GAAATTTATTGTCTATTTATAAAGATTATGAAGATCTTATTAGAACAGGAATTTATCTCAAAGGATCCAATAAGGATGTT GATTTTGCAATTTCCAAGTATCCTAAGATTATTAATTTTATTTCTCAAGGAATAAACGAAACATTTGATTTTGAAAATTT AGAAGATGAAATAAAGGAAATATTATCTTGA Protein sequence : MSNFFENYLRQVDDIETVSFVGRVQKIKGLLVESLGPQCAIGDLCLIDQRNGKKVCAEVLGFNGPYVSLMAYEGFSGIEV GNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINPINRSIFEDQILTGVKVLDGFLPVAKGQR VGIFSGSGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIA EYFREQGKDVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFNGNGGSVTGFYTVLVEGDDFTEP VADNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYLKGSNKDV DFAISKYPKIINFISQGINETFDFENLEDEIKEILS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 2e-77 | 43 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 4e-80 | 43 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 2e-80 | 43 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 7e-81 | 43 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 1e-80 | 43 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 4e-80 | 43 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 6e-83 | 43 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 4e-83 | 43 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-84 | 42 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-84 | 42 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-83 | 42 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 1e-75 | 42 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 2e-84 | 41 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 2e-84 | 41 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 7e-83 | 41 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-84 | 41 |
| escN | AFO66300.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 2e-70 | 41 |
| escN | AFO66415.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 2e-70 | 41 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 4e-67 | 41 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 3e-67 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliI | YP_005805395.1 | flagellar protein export ATPase FliI | VFG2144 | Protein | 4e-95 | 46 |
| fliI | YP_005805395.1 | flagellar protein export ATPase FliI | VFG0390 | Protein | 4e-82 | 44 |
| fliI | YP_005805395.1 | flagellar protein export ATPase FliI | VFG2499 | Protein | 7e-79 | 44 |
| fliI | YP_005805395.1 | flagellar protein export ATPase FliI | VFG0048 | Protein | 8e-82 | 43 |
| fliI | YP_005805395.1 | flagellar protein export ATPase FliI | VFG0515 | Protein | 8e-81 | 43 |
| fliI | YP_005805395.1 | flagellar protein export ATPase FliI | VFG1254 | Protein | 2e-83 | 42 |
| fliI | YP_005805395.1 | flagellar protein export ATPase FliI | VFG0192 | Protein | 1e-81 | 41 |
