Gene Information

Name : fliQ (BbuJD1_0274)
Accession : YP_005805381.1
Strain : Borrelia burgdorferi JD1
Genome accession: NC_017403
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 287622 - 287885 bp
Length : 264 bp
Strand : -
Note : identified by match to protein family HMM PF01313; match to protein family HMM TIGR01402

DNA sequence :
ATGACTGCAGGACACATTCTTTATTTAATTAGAATTTCTATTGAAAACATTATTATTTTATCAGCTCCAATGTTGATTAT
AGCTCTTATAGTTGGTCTTTTGATTTCAATTTTTCAAGCCATTACTTCAATTCAAGATCAAACTTTGAGTTTTATTCCAA
AGATTATTGTTATACTTTTAACCATTGTGATTTTTGGTCCTTGGATTTTGAATAAGCTTATGCAGTTTACCTATATGATT
TTTAGCCAATTGCAAAATGTTTAA

Protein sequence :
MTAGHILYLIRISIENIIILSAPMLIIALIVGLLISIFQAITSIQDQTLSFIPKIIVILLTIVIFGPWILNKLMQFTYMI
FSQLQNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS AAT96263.1 HrcS Virulence S-PAI Protein 4e-08 46
hrcS AAT96304.1 HrcS Virulence S-PAI Protein 4e-08 46
hrcS AAT96344.1 HrcS Virulence S-PAI Protein 4e-08 46
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 8e-08 44
hrcS AAT96147.1 HrcS Virulence T-PAI Protein 5e-06 44
hrcS AAT96201.1 HrcS Virulence T-PAI Protein 5e-06 44
hrcS NP_791221.1 type III secretion protein HrcS Virulence Hrp PAI Protein 1e-05 42
hrcS AAG33885.1 HrcS Virulence Hrp PAI Protein 1e-05 42