Gene Information

Name : EPYR_04018 (EPYR_04018)
Accession : YP_005804770.1
Strain :
Genome accession: NC_017392
Putative virulence/resistance : Unknown
Product : Transposase insF for insertion sequence IS3A/B/C/D/E/fA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 29194 - 29859 bp
Length : 666 bp
Strand : -
Note : Integrase, catalytic core, Integrase core domain

DNA sequence :
ATGGCGCACCTCGTCTTGCTGACGAGCTGCCGGAGTACAACATCAAAAACCATTGCCGCCAGCCTGCGACGTCAGGGGCT
GCGGGCGAAAGCGGCCCGCAAGTTCAGTCCGGTCAGTTATCGTGAACACGGCCTGCCCGTGTCAGAGAACCTGCTGAAAC
AGGATTTTTACGCCAGCGGCGCAAACCAGAAGTGGGCAGGTGACATCACCTACTTACGTACAGATGAGGGCTGGCTGTAT
CTGGCGGTGGTCATTGACCTGTGGTCGCGTTCCGTCATTGGCTGGTCGATGTCGCCGCGTATGACCGCACAACTGGCCTG
CGACGCACTGCAGATGGCGTTGTGGCGGCGAAAACGTCCTGAAAAAGTGATTGTTCACACTGACCGTGGTGGGCAGTACT
GTTCATCGGATTATCAGAGCTTGCTGAAATGTCATAATCTGCGCGGGAGCATGAGCGCAAAAGGCTGCTGTTATGACAAT
GCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAGGTGGAATGTATCCACGGAGAACGCTTTGCCAGCCGGGAAATAATGCG
GACAACGGTGTTTAATTATATCGAGTGTGATTACAATCGGTGGCGTCGTCACAGTGCCTGTGGCGGCCTTAGTCCTGAAC
AATTTGAAAACCAGAACCTCGCTTAG

Protein sequence :
MAHLVLLTSCRSTTSKTIAASLRRQGLRAKAARKFSPVSYREHGLPVSENLLKQDFYASGANQKWAGDITYLRTDEGWLY
LAVVIDLWSRSVIGWSMSPRMTAQLACDALQMALWRRKRPEKVIVHTDRGGQYCSSDYQSLLKCHNLRGSMSAKGCCYDN
ACVESFFHSLKVECIHGERFASREIMRTTVFNYIECDYNRWRRHSACGGLSPEQFENQNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-88 93
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-88 93
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 5e-88 92
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 3e-87 92
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 6e-37 48
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-37 48
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-37 48
unnamed AAF09030.1 unknown Not tested SHI-O Protein 5e-37 45
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 5e-37 45
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 9e-37 45
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 5e-37 45
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 9e-37 45
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 9e-37 45
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 6e-37 45
unnamed AAF09022.1 unknown Not tested SHI-O Protein 5e-37 45
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 7e-37 44
unnamed CAI43898.1 putative transposase Not tested LEE Protein 3e-25 43
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 3e-25 43
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-30 43
unnamed AAC31485.1 L0006 Not tested LEE Protein 2e-25 41
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 3e-25 41
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 2e-25 41
Z5089 NP_290241.1 transposase Not tested LEE Protein 2e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EPYR_04018 YP_005804770.1 Transposase insF for insertion sequence IS3A/B/C/D/E/fA VFG1631 Protein 7e-89 93
EPYR_04018 YP_005804770.1 Transposase insF for insertion sequence IS3A/B/C/D/E/fA VFG1706 Protein 3e-37 45
EPYR_04018 YP_005804770.1 Transposase insF for insertion sequence IS3A/B/C/D/E/fA VFG0785 Protein 8e-26 41