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Name : hofB (EPYR_00821) Accession : YP_005801572.1 Strain : Erwinia pyrifoliae DSM 12163 Genome accession: NC_017390 Putative virulence/resistance : Virulence Product : General secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 898424 - 899824 bp Length : 1401 bp Strand : - Note : General secretion pathway protein E (Type II traffic warden ATPase) (Pectic enzymes secretion protein outE), Bacterial type II secretion system protein E, Type II/IV secretion system protein, type_II_gspE: general secretory pathway protein E DNA sequence : ATGACACCGGCGACACAACGAGCGGTCGAAGCGATTTGTCTGGCTCATCAGGCGATTATCGTTGAGTTCAACGCACAGCG GCTACATATTGCGGTCGCTGAGACCCCCAGCCATACGCTGATGGCCGAACTGCGTTTTGCCGCCCACTGCCCTATTGAAG TTGAATGCTGGCCGCAAGCAAGGCTGGAGCAGTTTCACCAACGGAAGGAACTTCCGGCTCTGGCAGCAGCAGAGGGTGCG CCGGAGTACAACGGCACAGCAGTAGAAATCATCAACGCTTTACTGGTGCAAGCGTTACAAAAACGTGCATCTGATATTCA TATTGAGCCGCAGGAAAGTAGCCTGCGGCTGCGTTTACGTGTCGACGGCGTATTACAGCAATTGCCCCTGGCCGGAGTGG AAAGCAGCACACCGCTGATCGCTCGTCTGAAAATTCTTGCCAGCCTGGATATCTCGGAACGTCGGGTGCCACAGGACGGG CAGTTTTCACTGCTGCTGAATGGTAATACCGAATCATTCCGTCTCTCGACCCTGCCAACACGATTTGGTGAAAAGGCCGT AGTGCGCCTGATGCAAAGCGATAGCCATGCCATTGCGCTGGAAAACCTCGGCATGCCCGGCTCGCTGTTGAAGCGCTACC GCGAAGCACTGGCTCGTCCGCAGGGGATGATCCTGGTCACCGGCCCCACCGGCAGTGGCAAAACCTTTACGCTTTATAGC GGCCTGAGCTGGTTGAATATCGCCACGCGTAACCTGTGTAGCGTGGAGGATCCGGTGGAAATCCCCATGTTGGGGGTCAA TCAAACCCAGATCCACGCTAAGTCAGGGCTGGATTTTCACCGCGTGTTACGTGCTCTACTGCGCCAGGATCCCGACGTGA TTATGATCGGCGAGATCCGTGATGCTGAAACCGCTGAGATCGCCATAAAAGCAGCGCAGACAGGGCACCTGGTACTTTCA ACGTTGCATACCAACTCAACTACCGAAACGCTGGTGCGGCTTGGTCAGATGGGCGTGCCGGGATATTTGCTGGCATCAGC TCTTAAACTGGTCATTGCGCAGCGGCTGGTACGAAAGCTCTGTCCTCACTGCCGGCAACCTGCTACGGCAGTTTCCCATT TTCCTCCCCATATCTGGCCGGGAACCGTGCAAAACTGGCTGGCGGTGGGCTGTGAACGTTGCTTCTCGGGTTTTTATGGC CGTCTTCCTCTGTTTGAACTGCTGCCCATCTCCGCACGACTGCAAAACGCACTGGCAAAATCGGCCCAGCCGGAAGAACT GGCTAAAATTGCACGGCAGCAGGGAATGAACACGCTGTTCGTTGAAGGACTGCATTGCGTTAATCGCGGAGAAACAACGC TGGAGGAGCTAACGCGCGTAGCCGGAGGCAGCGATGGGTGA Protein sequence : MTPATQRAVEAICLAHQAIIVEFNAQRLHIAVAETPSHTLMAELRFAAHCPIEVECWPQARLEQFHQRKELPALAAAEGA PEYNGTAVEIINALLVQALQKRASDIHIEPQESSLRLRLRVDGVLQQLPLAGVESSTPLIARLKILASLDISERRVPQDG QFSLLLNGNTESFRLSTLPTRFGEKAVVRLMQSDSHAIALENLGMPGSLLKRYREALARPQGMILVTGPTGSGKTFTLYS GLSWLNIATRNLCSVEDPVEIPMLGVNQTQIHAKSGLDFHRVLRALLRQDPDVIMIGEIRDAETAEIAIKAAQTGHLVLS TLHTNSTTETLVRLGQMGVPGYLLASALKLVIAQRLVRKLCPHCRQPATAVSHFPPHIWPGTVQNWLAVGCERCFSGFYG RLPLFELLPISARLQNALAKSAQPEELAKIARQQGMNTLFVEGLHCVNRGETTLEELTRVAGGSDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-73 | 46 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-73 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hofB | YP_005801572.1 | General secretion pathway protein E | VFG2426 | Protein | 8e-75 | 47 |
| hofB | YP_005801572.1 | General secretion pathway protein E | VFG2048 | Protein | 8e-75 | 47 |
| hofB | YP_005801572.1 | General secretion pathway protein E | VFG1876 | Protein | 1e-70 | 44 |
| hofB | YP_005801572.1 | General secretion pathway protein E | VFG0182 | Protein | 2e-67 | 44 |
