Gene Information

Name : orfB (EPYR_00796)
Accession : YP_005801547.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Unknown
Product : transposase insK for insertion sequence element IS150
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 878269 - 879153 bp
Length : 885 bp
Strand : -
Note : Integrase, catalytic core, Integrase core domain

DNA sequence :
ATGCCGGGCGCTGAAAGACGTCATCGAAAAAAAGCTTTAAANCCAGCGATAAAGCGTGAGCTCGTCAGCTATCTGACCAC
GCAGTTTGCGATGAGCATACGCCAGGCATGNAGGACGTTATCGCTGAGCAGGACGGTGTTTCGTTATCAACCGGATACGC
GACGTGATGAAGCGGTGATCCAGAGGCTGACTGAGGCGGCTGAACGCTACCCCCGCTACGGATTTAAGAAGCTTTTCCAG
GTGCTTCGCAGGCAGGNCCACGTCTGGAACCACAAGCGTGTACACCGGATTTACTGTCTGCTAAAACTGAATTTTCGTCG
TAAGGGTAAGCAACGCCTGCCGGTGCGTAATCCGGCTCCGCTGGCAACGCCGGAAGCACTGAACCAAAGCTGGTCGATTG
ATTTTATGCACGACGCGCTGACATGTGGCCGACGTTTCCGGACTTTCAACGTCGTGGATGATTTTAACCGTGAAGCACTG
GCTATCGAAATTGACCTGAATATCCCGGCGCAGCGTGTCGTCCGGGTGCTGGACAGGATAGTGGCAAACCGTGGATATCC
GCTGAAGATGCGGATGGATAACGGACCGGAACTGATATCTCTGGCTCTGGCGCAATGGGCCGAAGAGCATGGCGTGATGC
TGGAATTTATCAAGCCGGGTAAGCCAACACAGAACGCGTTTATAGAAAGGTTTAACCGAACGTACCGGACCGAAATACTG
GATTTTTATCTGTTCAGAACACTGAATGAAGCACGGGAAATAACGGAACGCTGGCTGAATGAATACAACAGTGAGCGGCC
TCATGAATCCCTGAATAACCTGACGCCGGAAGAGTATCGGCTGATGGCTGAGAAACCGGAAATCTCAAAAAGTGTGTGGA
ACTAA

Protein sequence :
MPGAERRHRKKALXPAIKRELVSYLTTQFAMSIRQAXRTLSLSRTVFRYQPDTRRDEAVIQRLTEAAERYPRYGFKKLFQ
VLRRQXHVWNHKRVHRIYCLLKLNFRRKGKQRLPVRNPAPLATPEALNQSWSIDFMHDALTCGRRFRTFNVVDDFNREAL
AIEIDLNIPAQRVVRVLDRIVANRGYPLKMRMDNGPELISLALAQWAEEHGVMLEFIKPGKPTQNAFIERFNRTYRTEIL
DFYLFRTLNEAREITERWLNEYNSERPHESLNNLTPEEYRLMAEKPEISKSVWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-130 95
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 2e-42 42