Gene Information

Name : murD (EPYR_00784)
Accession : YP_005801535.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Unknown
Product : protein murD
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.2.9
Position : 863521 - 864837 bp
Length : 1317 bp
Strand : +
Note : UDP-N-acetylmuramoylalanine-D-glutamate ligase (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme)

DNA sequence :
ATGGCTGACTATCAGGGTAAAAAAGTGGTCATTATCGGGTTGGGGCTGACCGGTCTCTCCTGTATTGATTTCTTTATCGC
GCGCGGCGTTGTGCCGCGCATGATAGATACCCGTGTCGTGCCGCCGGGGCTGGAAAAGCTGCCGAAAAACGTGGAGTGCT
GGCTGGGGTCGATGAACGATAGCTGGCTGCTGGACGCCGATCTGATTGTTGCCAGCCCGGGCGTGGCGCTGGCGCATCCT
TCGCTGATGGCTGCGGCGCAAAACGGGGTGGAAATCATTGGCGATATCGAGCTGTTTTGTCGTGAAGCACAGGCACCGAT
CGTGGCGATCACCGGTTCCAACGGCAAAAGCACCGTGACAACGCTGGTTGGCGAGATGGCAAAAGCCGCAGGCTGGCAGG
TTGGCACAGGCGGCAATATTGGCCTGCCTGCACTGACGCTGTTGCAGCAACCGGCACAGCTTTACGTGCTGGAGCTGTCA
AGCTTCCAGCTGGAAACCGCCAGCAGCCTGCACGCGGCGGCGGCGACCATCCTCAACGTGACAGAGGATCATATGGATCG
CTATCCGCTGGGTATGCAGCAATATCGCGCGGCCAAGCTGCGCATCTATGAAAACGCCACGGTCTGCGTGGTTAATGCCG
ATGATGCGATGACCATGCCGGTACGCGGCGCGGATGCGCGCTGCGTGAGCTTTGGTGCCGACGTGGGCGATTATCACCTT
ACGCGCCAGCAGGGCAGTACCTGGCTGCGCGTGCAGGGAGAAAAAGTCCTGAATACCGACGAGATGCACTTGGTCGGTCA
GCACAACTATACCAATGCGCTGGCGGCGCTGGCGCTGGCGGATGCCGTTGGCCTGCCGCGCGCCACCAGCCTGAAAGCCT
TAACCACCTTTAACGGCTTACCGCATCGCTTCCAGCGGGTTCACGAACATAACGGCGTGCGCTGGATTAACGATTCCAAA
GCCACTAACGTTGGCAGCACCGAAGCGGCGCTGAATGGTTTGCATCCGGCTGGCATGTTGTGGCTGTTGCTGGGCGGCGA
CGGCAAGTCGGCGGATTTCAGTCCTCTTACCCGTTATCTGCAGGGCGATCGCATCCGGATTTACTGTTTCGGTCGTGATG
GTGCTGAACTGGCGGCATTGCGCCCGGAGGTAGCGGTGCAGACGGAGACGATGGCCGAAGCGGTGCAGCAGATTGCCACA
CAGGTACAGCCGGGGGATCTGGTGCTGCTGTCGCCCGCCTGTGCCAGCCTTGACCAGTTCAAAAATTTTGAGCAGCGTGG
CGATCTGTTTGCCCAACTGGCGCGGGAGGCTGGCTAA

Protein sequence :
MADYQGKKVVIIGLGLTGLSCIDFFIARGVVPRMIDTRVVPPGLEKLPKNVECWLGSMNDSWLLDADLIVASPGVALAHP
SLMAAAQNGVEIIGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGWQVGTGGNIGLPALTLLQQPAQLYVLELS
SFQLETASSLHAAAATILNVTEDHMDRYPLGMQQYRAAKLRIYENATVCVVNADDAMTMPVRGADARCVSFGADVGDYHL
TRQQGSTWLRVQGEKVLNTDEMHLVGQHNYTNALAALALADAVGLPRATSLKALTTFNGLPHRFQRVHEHNGVRWINDSK
ATNVGSTEAALNGLHPAGMLWLLLGGDGKSADFSPLTRYLQGDRIRIYCFGRDGAELAALRPEVAVQTETMAEAVQQIAT
QVQPGDLVLLSPACASLDQFKNFEQRGDLFAQLAREAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 4e-62 43
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 4e-62 43