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Name : clpV (EPYR_00669) Accession : YP_005801420.1 Strain : Erwinia pyrifoliae DSM 12163 Genome accession: NC_017390 Putative virulence/resistance : Virulence Product : type VI secretion system, core protein ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 738133 - 740748 bp Length : 2616 bp Strand : + Note : putative type VI secretion system, core protein COG542: ATPases with chaperone activity, ATP-binding subunit ATPase family associated with various cellular activities (AAA) DNA sequence : ATGTCAGAAATCAGCCGCGCCGTACTGTTCGGCAAACTGGATACGCTGTTATTTACCTCTCTGGAGAGCGCCACCGCGTT TTGTAAACTGCGCGGCAACCCCTATGTGGAGCTGGTGCACTGGCTGCACCAGCTGATGCAGCATCAGGGCGGTGACTTAC AGCAGCTTATCCGCCATTTTTCACTGGATGAAGAGGCGCTGACGCGGGATATCGTGGCGGCGCTCGACAGGCTGCCGCGC GGAGCCAGCGCGGTCTCTGACCTGTCCGAACATATCGACAGCGCGGTGGAGCGCGCCTGGGTTTACGGTTCGCTGAAGTT TGGCGTACAGCAGATCCGTGGCGGTCACCTGCTGATTGGCCTGCTGAAAACCTTTAACCTCGCCAACCTGCTGAAAGGCA TCTCGCCGCAGTTCAGCCGCATCAGCGTTGATGTGCTGCTGGAGCAGTTTGATCAGGTATTTGGCGACAGCAAAGAGGCA CAGCAGGTCAGCGCCGCGCCGCAGACTGCCAGCGGTGAAATCCCACAGCAGCAGGGTACGCTGGCGCAGTACGCGCAGGA TCTGACGGCGCGCGCGCGCGATGGCAAGATCGATCCGGTGGCCGGGCGCGACCAGGAGATCCGCCAGATGGTGGATATTC TGATGCGCCGCCGCCAGAACAACCCGCTACTCACCGGGGAAGCCGGGGTAGGCAAAACGGCGGTGGTGGAAGGGCTGGCG CTGCGTATCGCCGCAGGCGACGTGCCTGAACCGTTGCAGCAGGTGCAGCTGTGGCTGCTGGATATCGGCATGTTGCAGGC CGGAGCCGGGATGAAGGGTGAATTTGAGGCGCGGCTTCAGGCGTTGATTAATGAAGTGCAGTCCAGCCCGACGCCGATCG TCCTGTTTATTGATGAGATCCACACCCTGGTCGGCGCGGGCGGTCAGCAGGGTACCGGCGATGCCGCCAACCTGCTGAAA CCGGCGCTGGCACGCGGCCAGCTGCGCACCATCGGTGCCACCACCTGGGCGGAATACAAAAAGTACATCGAGAAAGATCC GGCGCTGACCCGCCGCTTCCAGACCGTGCAGGTGCACGAGCCGGACGAGGAGAAAGCGCTGCTGATGCTGCGCAGTACCG TCAGTCCGCTGGAACAGCACCACTGCGTCCTGCTGCTGGATGAAGCGGTAGCGGCGGCGGTCAAGCTCTCGCATCGCTAT ATTCCGGCGCGTCAGTTGCCGGATAAGGCGGTGGCGCTGCTGGATACCGCCTGCGCACGCGTTGCCGTCAGCCAGAGCGC CCAGCCACCGCAGCTGGAAGACTGCCTGCATCGCATTCATGCGCTGGAGATTGAGCGCGATATCGCCGGGCGTGAAGCGA AAGTCGGTATCGGCGAGGCCGGGCGCGTGGCGCAGTTGGAGCAGCAGCTGGCGGCGCTGGCCGAACAGCGCGACAGGCTT AACGAACGCTGGCAGCAGGAGCGCGCGCTGGTGGACGACATCATCGCCCTGCGCGGGCAGCTGAGTGCAGAGACGGCGGA AGACCAGGCGAGCCTGCATCAGCAGCTTACCGCACGCCAGCAGCAGCTGCGTGAACTTCAGGGCGAAGCCCCGCTGCTGT TCGCGGCGGTGGATGCCAACGTGGTGGCGGCGGTGGTCGCCGACTGGACCGGCATTCCGCTGGGGCGCATGGTGAAAAAC GAAATTGATGCGGTGCTCAAGCTGGCTGATACCCTTAATCAGCGGGTGATTGGTCAGCGCCACGGGCTTGACCTGATCGC CAAACGGGTGCGCACCTCGCGCGCACGCCTGGACGACCCGAACAAGCCGGTCGGGGTCTTTATGCTGTGCGGGCCATCCG GGGTGGGTAAAACCGAAACCGCGCTGGCGCTGGCGGAAACGCTGTACGGCGGCGAACAGAATATTATCACCATCAATATG AGTGAGTTCCAGGAAGCGCATACCGTTTCCACCCTGAAAGGTGCGCCGCCGGGTTATGTCGGCTATGGTGAGGGCGGAGT CCTGACCGAAGCGGTACGCCGCCGTCCGTACAGCGTGGTGCTGCTGGATGAAATTGAAAAGGCGCACCCGGACGTGCATG AAATCTTCTTCCAGGTGTTTGATAAGGGCTGGATGGAGGATGGCGAAGGGCGGCATATCGATTTCCGCAACACCATCATT ATTCTCACCTCTAACGTCGGTACGCAGCTGATTAGCGCCATGTGTGCTGACCCGGAACTGATGCCGCAGCCGGAGGATCT GGCCGGAGCGCTGCGCCCGCCGCTGCTGGAGGTGTTCCCCCCGGCGCTGCTGGGCCGCCTGCTGGTGGTGCCTTACTATC CGCTCAGTGATGAGGTGCTGGCCAATATCGTGCGTCTGCAATTACAGCGTATTCAGCGGCGGCTGGAGGAGAATCACGGT ATTATCTCCGAAGTGGATGACAGCGTGATTAGCCAGATTGTCCAGCGCTGTACCGAAGTGGAGTCCGGCGGTCGCATGGT CGACGCCATTCTTACCAATACCCTGTTGCCGCAAATGAGCCAGATGCTGCTGTCTGCCAGCGCGCGCGACGAACAATACC GTCGCCTGCGCGTTACGTTACATCAGGGCGAATTCCAGTGTCAGTTTGAGGCGTAA Protein sequence : MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQHQGGDLQQLIRHFSLDEEALTRDIVAALDRLPR GASAVSDLSEHIDSAVERAWVYGSLKFGVQQIRGGHLLIGLLKTFNLANLLKGISPQFSRISVDVLLEQFDQVFGDSKEA QQVSAAPQTASGEIPQQQGTLAQYAQDLTARARDGKIDPVAGRDQEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGLA LRIAAGDVPEPLQQVQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSPTPIVLFIDEIHTLVGAGGQQGTGDAANLLK PALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVHEPDEEKALLMLRSTVSPLEQHHCVLLLDEAVAAAVKLSHRY IPARQLPDKAVALLDTACARVAVSQSAQPPQLEDCLHRIHALEIERDIAGREAKVGIGEAGRVAQLEQQLAALAEQRDRL NERWQQERALVDDIIALRGQLSAETAEDQASLHQQLTARQQQLRELQGEAPLLFAAVDANVVAAVVADWTGIPLGRMVKN EIDAVLKLADTLNQRVIGQRHGLDLIAKRVRTSRARLDDPNKPVGVFMLCGPSGVGKTETALALAETLYGGEQNIITINM SEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGWMEDGEGRHIDFRNTII ILTSNVGTQLISAMCADPELMPQPEDLAGALRPPLLEVFPPALLGRLLVVPYYPLSDEVLANIVRLQLQRIQRRLEENHG IISEVDDSVISQIVQRCTEVESGGRMVDAILTNTLLPQMSQMLLSASARDEQYRRLRVTLHQGEFQCQFEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 54 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 6e-121 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 5e-121 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV | YP_005801420.1 | type VI secretion system, core protein ATPase | VFG2076 | Protein | 0.0 | 60 |
| clpV | YP_005801420.1 | type VI secretion system, core protein ATPase | VFG2084 | Protein | 5e-138 | 43 |
