Gene Information

Name : EPYR_00665 (EPYR_00665)
Accession : YP_005801416.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 733988 - 735862 bp
Length : 1875 bp
Strand : +
Note : putative type VI secretion system, core protein COG3519: Uncharacterized protein conserved in bacteria Bacterial protein of unknown function (DUF879)

DNA sequence :
ATGGACAGTAAGCAGCTCGACTATTACAACCGTGAACTGGCGTATCTGCGCGAAATGGGCGCGGAGTTTGCCGGGCGCTA
TCCAAAGGTGGCAGGCCGTCTTGGCATGCGCGGCGATGAGGTGGCCGACCCCTACGTTGAGCGGCTGATGGAGGGCTTTG
CCTTTCTCACCTCACGCGTGCAGCTGAAAATGGACGCCGAGTTTCCGCGCTTCTCCCAGCGCCTGCTGGAGATGATTGCG
CCGAACTACCTGTCGCCAACGCCGTCGATGGCGATAGCCGAACTGCAGCCGGACAGCCGCAAAGGCGATATCAGCAACGG
TTTTCTGGTGCCGCGCGGCACCATGATGGACAGCCAGGCGCTAAAGCAAAACGGCGTCACCTGCAGTTACACCACCGCCC
ATGACGTGATGCTGCAACCGGTGCGCATCAAAAGCGTTGAGCTGGGCGGCATTCCGGCCAACGTCCCGCTCGGCGAACTG
GGGTTAAGCCAGCGCGGCGCGGTCAGCGCCCTGCGCATCCGCATCGCCTGTGACGAGAGCATCACGCTTGCACATCTTAG
CTTCGACAGCCTGATGTTCTTCCTCAGCGGGCCGGATATGCAGGCGCTGCAGCTGCTGGAGCTGGTGATGCAGCACTACG
TGGGCGGCTACTGCCAGAGCGTGGGCAGCAGCCCGCAGCGCACGCTACTGGGCGATGATGCGCTCCAGCAGGAAGGGTTT
GCCGCAGACCAGGCGCTGCTGCCAAACGATCTGCGTAATTTCGATGGCTATCGCCTGTTGCAGGAGTACTTCGCCTTCCC
GGCCCGCTTCCAGTTTATCAGCATCAGCCAGCTGCGCCCGCTGTTACAAGCCTGTGACCCACAGGCGCGTGAATTCGATA
TCGTGCTGCTGCTGGACAGCGCCAACCCGGGGCTGGAGCGGGTGATTGACCACAGCCATCTGGCGCTGCACTGCACCCCG
GTAATCAACCTGTTTCCGAAAGTGGCGCAGCGGCAAAAGCTCAGCGACAGCGTGCACGAATATCATCTGGTGGTGGATAA
CATCCGCCCGCTGGACTACGAGATTTTCTCGGTGCAGAAGCTATACGCCAGTGGCGAGCGCCAGCGCGAGGAGCAGCAGT
TCCGCCCGTTCTGGAGCACCTTCAGCGATGACGGCGGTAACTACGGGGCTTACTTCTCGCTGCGGCGCGAACAGCGCACC
CTGTCCGAACATGCGCAGCGCTTCGGCACGCGCACCGGCTACGTCGGGTCGGAAGTGTTTCTGTCGCTGGTCGACGAGCA
CAATTCGCCCTGGCATGAGGATCTGCGCTATCTGACTGCCGAGGTGATGTGTACCAGCCGCGATCTGCCGCTACTGCTGC
TGCAACAGCAGGGGCAGTTTGTGATGCCTGATTCGATCCCGGTGCGCCAGCTTACGCTGCGTAAAGGGCCGACGCCGCCA
CGTCCGGCGCTGGCCGAGGGAAAAATGGCCTGGCGGCTGGTCAGCCATTTGCAGATGAACTATCTCAGCCTGATGGACGG
TGATGACGGGCAGGGGGCGGCGGCGTTACGCCAGATGCTCGGGCTTTACGCTAATCTCGCCGAAGCCGCTGCGGCGCGCC
AGATCGACGGTATTCGCCACTGCCAGCTGAAGCCGGTGTTCCGGCGCGTGCCGGAGCCTGGCCCGATTGTCTTTGCCCGT
GGCATCGGCATTGAGCTGGAGGTGGACGAGCAGGCGTTTTCCGGCAGCAGCCCGTGGCTACTCGGCAGCGTGCTGGAGCG
GGTGTTCTCGCGGCTGGTGGCGATCAACACCTTTACCGAAATGACGCTGACCAGCCAGCAGCGCGGCGAGGTCGGCTACT
GGGCGCCGCGCATGGGCAAAAGGACACTGATATGA

Protein sequence :
MDSKQLDYYNRELAYLREMGAEFAGRYPKVAGRLGMRGDEVADPYVERLMEGFAFLTSRVQLKMDAEFPRFSQRLLEMIA
PNYLSPTPSMAIAELQPDSRKGDISNGFLVPRGTMMDSQALKQNGVTCSYTTAHDVMLQPVRIKSVELGGIPANVPLGEL
GLSQRGAVSALRIRIACDESITLAHLSFDSLMFFLSGPDMQALQLLELVMQHYVGGYCQSVGSSPQRTLLGDDALQQEGF
AADQALLPNDLRNFDGYRLLQEYFAFPARFQFISISQLRPLLQACDPQAREFDIVLLLDSANPGLERVIDHSHLALHCTP
VINLFPKVAQRQKLSDSVHEYHLVVDNIRPLDYEIFSVQKLYASGERQREEQQFRPFWSTFSDDGGNYGAYFSLRREQRT
LSEHAQRFGTRTGYVGSEVFLSLVDEHNSPWHEDLRYLTAEVMCTSRDLPLLLLQQQGQFVMPDSIPVRQLTLRKGPTPP
RPALAEGKMAWRLVSHLQMNYLSLMDGDDGQGAAALRQMLGLYANLAEAAAARQIDGIRHCQLKPVFRRVPEPGPIVFAR
GIGIELEVDEQAFSGSSPWLLGSVLERVFSRLVAINTFTEMTLTSQQRGEVGYWAPRMGKRTLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 6e-117 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EPYR_00665 YP_005801416.1 hypothetical protein VFG2074 Protein 3e-123 45