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Name : hsdR (EPYR_00609) Accession : YP_005801360.1 Strain : Erwinia pyrifoliae DSM 12163 Genome accession: NC_017390 Putative virulence/resistance : Unknown Product : type I restriction-modification system endonuclease Function : - COG functional category : - COG ID : - EC number : 3.1.21.3 Position : 673976 - 677116 bp Length : 3141 bp Strand : - Note : Restriction endonuclease, type I, EcoRI, R subunit, Type I restriction enzyme R protein N terminus (HSDR_N), hsdR: type I site-specific deoxyribonuclease,HsdR family DNA sequence : ATGCTAAGCGAAGACGATTTGGAGCAACTGAGCCTGGGCTGGTTTGCCGGACAGGGATGGGAAGTACTATACGGGCCGGA TATCGCCCCCGATGGCGCTAACCCGCTGCGCACCTCCTTTCAGGATGTGTTTCTGCGCCCGGTGTTACGCCAGCAGCTGG CGCAGATCAACCCGCATCTGCCGGACAGCGTGCTTGACGAGGTGGTCAGCCGCGTCACCCGGCCAGAAAGCCCCGATATC GTCGCCAGCAATAAAGCCTTTCACCATCTGCTGTTAACCGGCGTGCCGGTTGCCTATAAGCGCGACGACCAGATAATCCA CGATACCGCCCTGCTGATGGATTTTAATCGCCCGGACCATAACCGTTTCAGCGTGGTCAACCAGGTGGCGATAAAGGGAA CGAAACAGGTGCGCCGCCCGGACGTGATTGGCTATATCAACGGCCTGCCGGTGGCGGTTATCGAACTGAAAAGCCCGGTT GATGCCAATGCCGATATCTGGGCGGCGTTTAACCAGCTGCAAACCTATAAAAATGAAGTCAGCGACCTGTTTATCTGTAA TGAAGTGCTGGTCATCAGCGATGGCTATAACGCGCGCATCGGTTCCCTGACCGCCGATGAAGAGCGTTATCTGCCGTGGA AAACCCTCAGCAATGAAGACGATAAGCCAGTGCGCGAATGCCAGCTGGAAACGGTGATTAACGGCTTTTTCAACCGCGAA CTGCTGCTGGATTATCTGCGCTATTTCATCCTGTTTGAACATGACGGCCAGCGCACGATGAAAAAAATTGCCGCCTGTCA CCAGTTCCACGCGGTGCGTGAAGCGGTCAGTGCCACCATCGTCGCCGCCACCGGTCAGTATTTGCTGCTGCGCAGTGATA TTAAACCCGGCAGTAAGAAAGCCGGCGTGGTGTGGCATACCCAGGGTTCAGGCAAGAGCATCTCCATGTGCTGCTATGCC GGGAAACTGTTACAGCAGGCAGCGATGAATAACCCGACCATCGTGGTGGTCACCGATCGCAACGATCTCGACGGCCAGCT GTACGCCACCTTTTGCCAGGCGAAAGACCTGCTGAAGCAGGAGCCGCAGCAGGCCAGCGACCGCGAGCAGCTGCGCGCCA TGCTGGCAGCGCGTGGATCCGGCGGTATCATCTTTACCACCGTACAGAAATTCGCGCCGCTGGACGGCGAGCAGGCCCAT CCGGCGCTGAATCTGCGCGACAATATCGTGGTGATCTCCGACGAAGCCCACCGCAGCCAGTATGGCTTAAACGCCACGCT GGACAGGCAAAGCGGTGCCTATAAATACGGCTACGCGAAGCATATGCGTGATGCGCTGCCGAACGCCGCATTTATGGGCT TCACCGGCACGCCGGTCTCGGCAGAAGACAAAGATACCCGCGCCGTGTTTGGTGATTACGTGTCGATTTACGATATTCAG GACGCGGTCGATGACGGCGCAACGGTACCGATTTACTATGAATCGCGGCTGGCAAAACTCGATCTCAATCATGACGAGCT GGAAGCGCTCTCCAGCCAGGTCGAGGAGCTGGTCGAAGACGAAGAGAGCGGACAGAAAGAGAAGACCAAAGGTGACTGGA GCCGTCTGGAAAAGCTGGTCGGCTCCAGGCCGCGTATTGAGCAGGTGGCGGCCGACCTGGTCAAACATTTTGACGCGCGC AACGCCACCATGAACGGTAAGGCAATGATCGTCGCCATGAGCCGCGATATCTGCGTGCGCCTGTATGATGCGCTGGTGGA TCTGCGCCCGCAATGGCACAGCGAGGAGGTGGATAAAGGGGCAATTAAAATCATCATGACCGGCTCGGCGTCGGATAAAG CGCCGCTTCAGCCGCATATCTACAATAAGCCGACGAAAAAACGCCTCGAAGCACGCTTTAAGGATCTGAACGATCCGCTA AAAATCGTTATCGTGCGCGATATGTGGCTCACCGGTTTCGATGCGCCCTGCTGCCACACCATGTATATCGATAAGCCGAT GCGCGGCCATAACCTGATGCAGGCCATTGCCCGCGTCAACCGCGTGTTTAAAGATAAACCCGGCGGGCTGGTGGTGGATT ATATCGGCATTGCCAATGAGCTGAAGCAGGCGCTGAAAACCTATACCGACGCCAAAGGTAAAGGACAGACGACGATTGAT GCCAGAGAAGCCTTTGCCATACTGCTGGAAAAACTCGATATTATTCACGGCATGTTTGCCAAAACCCCCACCGATGCCGG CTTCGACTACTCGGCGTTTGCCGATAACCCGCAGCGGGTGCTGCTGGATGCGGCAAACTATATTCTCGGCCTCGACGAGG GTAAAAAGCGCTATTTCGACGTGGTGCTGGCGCTGAATAAGGCCCTGTCGCTGTGCAGCACGCTGGATGAGGTGAAACCG CTGCAAAAAGAGCTGGCCTTCCTGTCGGCGGTGAAGGTGGCGATGATTAAACTCACCACCACCGACCAGAAATTCAGCCA GTCTGAGAAGCATTCACTGCTGAGCCGTATTCTGGATAACGCCATTGTGGCAACCGGCGTCGATGACGTGTTTGCGCTGG CCGGGCTGGACAAGCCCAATATCGGGTTACTTTCCGATGAGTTTTTGCAGGAAGTGCAGGATATGCCGCAGCGTAATCTG GCGGTGGAGCTGCTGCAAAAGCTGCTGAATGACGGCATCCATGCGCGCACCAACAATAACGTGGTGCAGGAGAAGAAGTA CTCGGAACGCCTGAAAGCCGTGCTGCTCAGATACCACAACCGGGCGATTGAAACCGCTCAGGTGATCGAAGAGCTGATCC AGATGGCGAAAGATTTTCAGGCGGCGATGGCGCGTGATGATGCGCTCGGCCTCAATCCTGACGAAATTGCCTTTTATGAT GCGCTGGCGGAAAACGAAAGCGCGGTACGCGAGCTGGGCGACGAGATCCTCAAAAAACTGGCGGTTGAAGTCACCCAGAA GCTGCGCCAGTCGACCACCGTTGACTGGCAGAAGCGGGAAAGCGTGCGTGCGCGTCTGCGCATTCTGGTGCGCCAGACGC TGCGTAAATACAAATATCCGCCGGACAAAACCCCTTATGCGGTTGAACTGATCCTGAAGCAGGCGGAAGTGATGTCGAAT AGCTGGACGGTTCAGGGCTGA Protein sequence : MLSEDDLEQLSLGWFAGQGWEVLYGPDIAPDGANPLRTSFQDVFLRPVLRQQLAQINPHLPDSVLDEVVSRVTRPESPDI VASNKAFHHLLLTGVPVAYKRDDQIIHDTALLMDFNRPDHNRFSVVNQVAIKGTKQVRRPDVIGYINGLPVAVIELKSPV DANADIWAAFNQLQTYKNEVSDLFICNEVLVISDGYNARIGSLTADEERYLPWKTLSNEDDKPVRECQLETVINGFFNRE LLLDYLRYFILFEHDGQRTMKKIAACHQFHAVREAVSATIVAATGQYLLLRSDIKPGSKKAGVVWHTQGSGKSISMCCYA GKLLQQAAMNNPTIVVVTDRNDLDGQLYATFCQAKDLLKQEPQQASDREQLRAMLAARGSGGIIFTTVQKFAPLDGEQAH PALNLRDNIVVISDEAHRSQYGLNATLDRQSGAYKYGYAKHMRDALPNAAFMGFTGTPVSAEDKDTRAVFGDYVSIYDIQ DAVDDGATVPIYYESRLAKLDLNHDELEALSSQVEELVEDEESGQKEKTKGDWSRLEKLVGSRPRIEQVAADLVKHFDAR NATMNGKAMIVAMSRDICVRLYDALVDLRPQWHSEEVDKGAIKIIMTGSASDKAPLQPHIYNKPTKKRLEARFKDLNDPL KIVIVRDMWLTGFDAPCCHTMYIDKPMRGHNLMQAIARVNRVFKDKPGGLVVDYIGIANELKQALKTYTDAKGKGQTTID AREAFAILLEKLDIIHGMFAKTPTDAGFDYSAFADNPQRVLLDAANYILGLDEGKKRYFDVVLALNKALSLCSTLDEVKP LQKELAFLSAVKVAMIKLTTTDQKFSQSEKHSLLSRILDNAIVATGVDDVFALAGLDKPNIGLLSDEFLQEVQDMPQRNL AVELLQKLLNDGIHARTNNNVVQEKKYSERLKAVLLRYHNRAIETAQVIEELIQMAKDFQAAMARDDALGLNPDEIAFYD ALAENESAVRELGDEILKKLAVEVTQKLRQSTTVDWQKRESVRARLRILVRQTLRKYKYPPDKTPYAVELILKQAEVMSN SWTVQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 89 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 45 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 45 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 45 |
