Gene Information

Name : kdpB (EPYR_03840)
Accession : YP_005804591.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase, B subunit
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.12
Position : 3888449 - 3890497 bp
Length : 2049 bp
Strand : -
Note : Potassium-transporting ATPase B chain (Potassium-translocating ATPase B chain) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B), TC 3.A.3.7.1 Potassium-transporting ATPase B chain (Potassium-transloca

DNA sequence :
ATGAGTCGTAATCAACTGGCGCTGTTTGACGCGGCGCTGATGCGTGTCGCGCTGCTCGATGCGTTGAAAAAGCTGAACCC
GCGTACCCAGGTACGCAACCCGGTGATGTTTGTGGTTTGGCTGGGAAGTGTGATCACCACGCTGCTGGCAATCGCGATGG
CTGCCGGTAAAACCCCTGGCGATACAGGGTTTACCACGGCGATTTCAGTCTGGCTGTGGTTTACCGTGCTGTTTGCCAAC
TTTGCCGAAGCGCTGGCGGAAGGCCGCAGCAAGGCACAGGCCAACAGCCTGAAAGGCGTGACCAAAACCAGCATGGCCAA
AAAGCTCAACGAGGCGAAGTACGGGGCCAGCCATCATCCGGTAGCGGCTGATACGCTGCGTAAAGGCGACTGGGTGCTGG
TAGAAGCCGGCGATATCATCCCCTGTGACGGCGAAGTGCTGGAGGGCGGTGCCTCGGTGGACGAGAGTGCAATCACGGGC
GAATCCGCACCGGTGATCCGCGAATCCGGCGGCGACTTCTCTTCGGTGACCGGCGGTACACGCATTCTCTCTGACTGGCT
GGTGGTGCAGTGCAGCGTGAATCCCGGGGAAACCTTCCTTGACCGCATGATAGCGATGGTGGAAGGCGCGACAAGACGCA
AGACGCCAAATGAAATCGCCCTTACCATCCTGCTGCTGGCACTGACCATCGTGCTGCTGCTGGCGACCGCCACACTCTGG
CCGTTCTCTGCCTGGGGCGGTAACCCGGTCAGCATCACGGTGCTGGTGGCTCTGCTGGTGTGCCTGATCCCAACCACTAT
CGGCGGGTTGCTATCGGCGATTGGCGTGGCGGGGATGAGCCGGATGCTGGGGGCTAACGTCATTGCCACCAGCGGTCGCG
CGGTGGAAGCCGCAGGGGACGTTGACGTACTGCTGCTGGATAAAACCGGCACCATCACGCTGGGTAATCGCCAGGCAACG
CAGTTTCTGCCGGCGGAGGGCGTGAGCGAAGAGCAGCTGGCTGATGCCGCCCAGCTGGCCTCGCTGGCTGATGAAACGCC
GGAAGGGCGCAGCATTGTGGTGCTGGCCAAGCAGAAATTCAATCTGCGCGAACGCGACCTTAACAGCATGGGGGCGACCT
TTATTCCGTTCTCGGCGCAAACGCGCATGAGCGGGGTCAATGTACAGCAGCGGGCAATCCGCAAAGGCGCGGCGGATGCG
GTGCGCCGTTATATCGACAGCAACGGCGGCCAGTTCCCGAACGAGGTCAACAGCCTGGTCGATCGGGTGGCACGCGCGGG
CGGCACGCCGCTGGTGGTCAGTGACGGTAACCGGGTGATGGGCGTGGTGGCGCTGAAGGACATCGTCAAAGGCGGGATCA
AAGAACGCTTTGCCGAACTGCGCAAAATGGGGATTAAAACCGTGATGATCACCGGTGATAACCCACTGACTGCCGCCGCG
ATTGCTGCCGAAGCCGGGGTGGATGACTTTCTGTCTGAAGCCACGCCGGAAGCCAAACTGGCGCTGATCCGCCAGTATCA
GGCGGAAGGACGGCTGGTGGCGATGACCGGTGATGGCACCAACGATGCCCCGGCGCTGGCGCAGGCCGACGTGGCGGTGG
CGATGAACTCCGGCACCCAGGCGGCAAAAGAGGCCGGCAACATGGTGGATCTGGACTCGAACCCCACCAAGCTGCTGGAA
GTGGTGCATATCGGTAAGCAGATGCTGATGACGCGAGGTTCATTGACCACCTTCAGCATCGCCAATGACGTGGCCAAATA
TTTCGCCATTCTGCCCGCCGCGTTTGCGGCGACCTATCCGCAGCTGAATCAGCTTAACGTGATGGGGCTGCATTCACCGG
CGTCGGCGATCCTTTCGGCGGTTATTTTTAACGCATTGGTGATTATATTTTTGATTCCGCTGGCGCTGAAAGGCGTGAGC
TACCGACCGCTCAGCGCGGCGGCACTGCTAAGACGTAACCTGTGGATCTACGGTGCAGGCGGGCTACTGGTACCCTTCTT
CGGCATCAAACTGATTGATATGTTGCTGACCGTAACCGGTCTGGCATAA

Protein sequence :
MSRNQLALFDAALMRVALLDALKKLNPRTQVRNPVMFVVWLGSVITTLLAIAMAAGKTPGDTGFTTAISVWLWFTVLFAN
FAEALAEGRSKAQANSLKGVTKTSMAKKLNEAKYGASHHPVAADTLRKGDWVLVEAGDIIPCDGEVLEGGASVDESAITG
ESAPVIRESGGDFSSVTGGTRILSDWLVVQCSVNPGETFLDRMIAMVEGATRRKTPNEIALTILLLALTIVLLLATATLW
PFSAWGGNPVSITVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQAT
QFLPAEGVSEEQLADAAQLASLADETPEGRSIVVLAKQKFNLRERDLNSMGATFIPFSAQTRMSGVNVQQRAIRKGAADA
VRRYIDSNGGQFPNEVNSLVDRVARAGGTPLVVSDGNRVMGVVALKDIVKGGIKERFAELRKMGIKTVMITGDNPLTAAA
IAAEAGVDDFLSEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLLE
VVHIGKQMLMTRGSLTTFSIANDVAKYFAILPAAFAATYPQLNQLNVMGLHSPASAILSAVIFNALVIIFLIPLALKGVS
YRPLSAAALLRRNLWIYGAGGLLVPFFGIKLIDMLLTVTGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 6e-177 64
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 4e-177 64
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 2e-145 56
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-144 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-144 55
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 7e-144 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-144 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-144 55