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Name : soxS (EPYR_03535) Accession : YP_005804286.1 Strain : Erwinia pyrifoliae DSM 12163 Genome accession: NC_017390 Putative virulence/resistance : Resistance Product : HTH-type transcriptional regulator soxS Function : - COG functional category : - COG ID : - EC number : - Position : 3582135 - 3582530 bp Length : 396 bp Strand : + Note : Bacterial regulatory helix-turn-helix proteins,AraC family DNA sequence : ATGCATGACGACATCATCAACACCCTGACCAACTGGATCGATAATAATCTGGACAAAGCCCTGTCGATTGATGAAGTGGC TGCAAAATCGGGCTACTCGAAGTGGCATTTACAGCGTATGTTCCGTACGGTGACAAAACAGACGCTGGGTGGGTATATCC GGGAACGCCGTTTAACGCTGGCTGCCGAAGCGCTGCGCCAGAGTCAGCGCCCGGTTTTTGACATCGCCATGCAGTACGGC TACGACTCGCAGCAAACTTTCTCCCGGGTATTTCGTCGTCAGTTTTCCCAGACGCCAACGGCTTATCGTAATACCATGCG CCGCCAGATGTTGCAGCGTAGCAGCTGGCATTTTGACTGCGGCGACTCCCCAGCCAGCAGCGTTCAATCGCAGTGA Protein sequence : MHDDIINTLTNWIDNNLDKALSIDEVAAKSGYSKWHLQRMFRTVTKQTLGGYIRERRLTLAAEALRQSQRPVFDIAMQYG YDSQQTFSRVFRRQFSQTPTAYRNTMRRQMLQRSSWHFDCGDSPASSVQSQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| soxS | YP_219131.1 | DNA-binding transcriptional regulator SoxS | Not tested | SPI-4 | Protein | 6e-33 | 67 |
| tetD | AAL08447.1 | putative transcriptional regulator TetD | Not tested | SRL | Protein | 2e-23 | 49 |
| tetD | AEA34665.1 | tetracycline resistance protein D | Not tested | Not named | Protein | 2e-23 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | CP000647.1.gene4499. | Protein | 3e-34 | 70 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | CP001918.1.gene327.p | Protein | 4e-34 | 68 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | NC_002695.1.914293.p | Protein | 4e-33 | 67 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | CP001138.1.gene4488. | Protein | 2e-33 | 67 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | BAC0371 | Protein | 4e-33 | 67 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | CP000034.1.gene4505. | Protein | 9e-33 | 66 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | CP001138.1.gene612.p | Protein | 2e-27 | 49 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | NC_010558.1.6276025. | Protein | 1e-23 | 49 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | CP000647.1.gene1624. | Protein | 1e-23 | 48 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | CP001918.1.gene2033. | Protein | 2e-23 | 47 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | CP001138.1.gene1637. | Protein | 3e-23 | 46 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | BAC0560 | Protein | 3e-23 | 46 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | NC_002695.1.917339.p | Protein | 3e-23 | 46 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | CP000034.1.gene1596. | Protein | 3e-23 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | VFG0585 | Protein | 2e-33 | 67 |
| soxS | YP_005804286.1 | HTH-type transcriptional regulator soxS | VFG1038 | Protein | 1e-23 | 49 |
