Gene Information

Name : pilS (EPYR_03478)
Accession : YP_005804229.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Virulence
Product : prepilin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3510470 - 3511063 bp
Length : 594 bp
Strand : -
Note : PilS N terminal, PilS N terminal

DNA sequence : 
ATGAAAATTAAAAATAAAAACGTAAAGAACAATATTGATAGCGGTGCGATCTCACTTTTTGAGGCAGGGATCTGGATAAC
CATCTCCTTAATAGTGTTGGTTATTGGTATCAGTATAGGGGGTGGGTTGTTCAGTCGTAATGATACCAATACTGAACTCA
GTAATATTAGTGAGCTGATGAATAACAGCCGTACCTTGTTGAAAACTAACGGAACTTACAATTTTGAGGGCGGCGAATCC
ATGATTGGGGCGTTGATTCAGTTCGGTGGTGTTCCTGGTAATATGTCAATAATTGGGGATAAAAGTTCAGGTAAAGCACA
TCTGCAAAACGTATGGGGAGGTGCGGTCTCCGTCGAGCCAGCTGCAGACAGTGCCGGGGAATTAACAGGCTTTCACCTTA
TCTATCAAATGGTGCCACAAGAGGCCTGTATCGCTATTGCTCAGCGTCTCAGCACGACCAGTTTTGTTCACGCTATCCGC
ATCAATGACACCATCAACCGGGGTTCAATATCGGCAGGGAATCTGGGGGGGCAATGTGTAGCCGACAGTGGCGAACATAA
AGGGAATATATTGAGCTTCATCAGTGATAACTAA

Protein sequence : 
MKIKNKNVKNNIDSGAISLFEAGIWITISLIVLVIGISIGGGLFSRNDTNTELSNISELMNNSRTLLKTNGTYNFEGGES
MIGALIQFGGVPGNMSIIGDKSSGKAHLQNVWGGAVSVEPAADSAGELTGFHLIYQMVPQEACIAIAQRLSTTSFVHAIR
INDTINRGSISAGNLGGQCVADSGEHKGNILSFISDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3500 YP_001007661.1 putative type IV prepilin Virulence YAPI Protein 3e-21 41
pilS YP_001402683.1 type IV pilus biogenesis protein Virulence YAPI Protein 4e-23 41
pilS CAF28492.1 putative major pilin subunit Virulence YAPI Protein 1e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilS YP_005804229.1 prepilin VFG2315 Protein 1e-21 41