|
Name : hrcV (EPYR_03334) Accession : YP_005804085.1 Strain : Erwinia pyrifoliae DSM 12163 Genome accession: NC_017390 Putative virulence/resistance : Virulence Product : type III secretion inner membrane protein HrcV Function : - COG functional category : - COG ID : - EC number : - Position : 3382036 - 3384183 bp Length : 2148 bp Strand : + Note : Type III secretion inner membrane protein HrcV,FHIPEP family DNA sequence : ATGAGTTCTCTGTTTGTCTGGCTAAACCGCCTCGCCATCAGTGCGATGCAGCGCTCGGAAGTGGTGGGCGCTGCGATTGT CATGTCGATCGTTTTCATGATGATCATTCCGCTGCCCACCGGCCTGATCGACGTGCTGATTGCGCTCAATATCTGCATTT CATCACTGCTGATCGTGCTGGCGATGTATTTGCCTAAACCGCTGGCTTTCTCAACGTTTCCCTCCGTCCTGCTGTTGACC ACCATGTTCAGGCTGGCGCTGTCGATCTCAACCACCCGCCAGATCCTGCTGCAACAGGATGCCGGGCATATCGTTGAAGC CTTTGGTAATTTCGTCGTCGGCGGTAATCTGGCGGTCGGTCTGGTGATCTTCCTGATCCTGACGGTGGTAAACTTTCTGG TGATCACCAAAGGCTCTGAACGCGTGGCGGAAGTCGCTGCACGCTTTACCCTCGACGCCATGCCGGGCAAGCAGATGTCG ATAGACAGCGACCTGCGTGCGGGGCTGATTGAAGCGCATCAGGCGCGCCAGCGCCGGGAAAACCTGGCGAAAGAGAGCCA GCTGTTCGGCGCAATGGATGGCGCAATGAAGTTTGTTAAAGGCGACGCGATTGCCGGACTGGTGATTGTCTTTATCAATA TGATCGGCGGTTTTGCTATCGGCGTGCTGCAAAACGGCATGGAGGCCGGTGCCGCAATGCATATCTATTCGGTACTGACC ATCGGTGACGGCCTGATCGCCCAGATCCCCGCGCTGCTGATCTCTCTGACCGCCGGGATGATCATCACGCGCGTCTCCGC CGACGGTCAGCAGGTTGATGCGAATATCGGCCGCGAAATCGCCGAACAGCTTACCAGCCAGCCTAAGGCCTGGATCATGT CCGCAGCCGGGATGCTGGGTTTTGCGCTGCTGCCCGGCATGCCAACGACGGTATTTGTCATCATCAGCGCCATCGCGCTC GGCAGCGGGCTGTTCCAGCTGTGGCGCATCAAACAGCAGGATAACCAGCAGCAGGCCGACGAGCTGCAGGCACAGCAGCT GGCGCCAGAAGATAACGGCCATCAGGATCTGCGCCGTTTCAACCCGACGCGCGCCTATCTGCTGCAATTCAGCCAGGCAC ATCTCAATAGCGAAGCCGCTGAATCACTGATTCAGCATATCCGCCGCCTGCGTAACCGGCTGGTTTATCACTTTGGTTTT ACCCTGCCCAGTTTTGATATCGAGTTCTCACCGACGTTAGCCGCCGACGAATTCCGCTTCTGCGTGTATGAAATTCCGCT GGTGACCGCCACCTTCGACGTCGGGCAGCTGGCGGTCAGAACAAGCAGCATTGAAATGCATCTTGCCGATGGCGACAGTG ACGGCCAGATCCAGCCCGGCCAGGCCGAACGCGATGAACATCACTGGTGCTGGCTTCCCCCGCAGCATCCGTTGCTGCAA CAGGAAGATCGGCACTACTGGAATGCACAACAGCTGATCATGCTACGGATGGAGCAGGCCATCCACCAAAGCGGGTCGCA GTTTATCGGTTTGCAGGAGAGTAAATCGATTCTCAACTGGCTGGAAAGCGAGCAGCCAGAGCTGGCGCAGGAGCTGCAAC GCATTATGCCGCTTTCCCGTTTTGCGGCGGTACTACAACGCCTGGCCTCGGAACGTATTCCGCTGCGTTCGGTACGTACC ATTGCCGAAACGCTGATTGAGCACGGCCAGCATGAGCGCGACAGCGCTGCCCTGACCGACTTTGTGCGTATCGCGCTGAA AGAGCACATCTGCCACCAGTATCAGCAGCCCAACGGGCTGAATGTCTGGCTGCTGACGCCGGAAACCGAAGAACTGCTGC GCGATTCGCTGCGTCAGGCCCAGAGCGAAACCTTCTTCTCCCTGGCACAGGATTATGGCATCAACCTGCTGAATCAAATG CGCAGCGCTTTCCCGCCTTATGACAACAGCCCGGCGCTGATCCTCGTTGCCCAGGATTTACGCAGCCCGCTGCGCGCACT GTTGAAAGACGAGTTTCATGCCGTGCCGGTGCTGTCCTTTGCTGAATTAACCAGTAACGTTGCCATCAATGTGCTGGGAC GGCTCGATTTACAACAGTCACCGCCAGACCTTCAGGAAAATGACCCATGCATGAATTACGCGTACTGA Protein sequence : MSSLFVWLNRLAISAMQRSEVVGAAIVMSIVFMMIIPLPTGLIDVLIALNICISSLLIVLAMYLPKPLAFSTFPSVLLLT TMFRLALSISTTRQILLQQDAGHIVEAFGNFVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVAARFTLDAMPGKQMS IDSDLRAGLIEAHQARQRRENLAKESQLFGAMDGAMKFVKGDAIAGLVIVFINMIGGFAIGVLQNGMEAGAAMHIYSVLT IGDGLIAQIPALLISLTAGMIITRVSADGQQVDANIGREIAEQLTSQPKAWIMSAAGMLGFALLPGMPTTVFVIISAIAL GSGLFQLWRIKQQDNQQQADELQAQQLAPEDNGHQDLRRFNPTRAYLLQFSQAHLNSEAAESLIQHIRRLRNRLVYHFGF TLPSFDIEFSPTLAADEFRFCVYEIPLVTATFDVGQLAVRTSSIEMHLADGDSDGQIQPGQAERDEHHWCWLPPQHPLLQ QEDRHYWNAQQLIMLRMEQAIHQSGSQFIGLQESKSILNWLESEQPELAQELQRIMPLSRFAAVLQRLASERIPLRSVRT IAETLIEHGQHERDSAALTDFVRIALKEHICHQYQQPNGLNVWLLTPETEELLRDSLRQAQSETFFSLAQDYGINLLNQM RSAFPPYDNSPALILVAQDLRSPLRALLKDEFHAVPVLSFAELTSNVAINVLGRLDLQQSPPDLQENDPCMNYAY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | AAB05999.2 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 98 |
| hrcV | AAT96256.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 69 |
| hrcV | AAT96297.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 69 |
| hrcV | ABA47273.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 69 |
| hrcV | AAT96337.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 68 |
| hrcV | ABQ88352.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 63 |
| hrpI | AAA03015.1 | HrpI | Virulence | Hrp PAI | Protein | 0.0 | 63 |
| hrcV | NP_791229.1 | type III secretion protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 63 |
| hrcV | AAG33877.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 63 |
| hrcV | AAT96139.1 | HrcV | Virulence | T-PAI | Protein | 0.0 | 63 |
| hrcV | AAT96193.1 | HrcV | Virulence | T-PAI | Protein | 0.0 | 63 |
| hrcV | AAR25631.1 | type III secretion protein HrcV | Not tested | Not named | Protein | 0.0 | 63 |
| invA | AAS66860.1 | InvA | Not tested | SSR-2 | Protein | 7e-102 | 42 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 2e-106 | 41 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 2e-125 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hrcV | YP_005804085.1 | type III secretion inner membrane protein HrcV | VFG0064 | Protein | 4e-132 | 43 |
| hrcV | YP_005804085.1 | type III secretion inner membrane protein HrcV | VFG0384 | Protein | 2e-130 | 41 |
