Gene Information

Name : xerD (EPYR_03168)
Accession : YP_005803919.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3230218 - 3231168 bp
Length : 951 bp
Strand : -
Note : Tyrosine recombinase XerD, Phage integrase family,recomb_XerD: tyrosine recombinase XerD

DNA sequence :
GTGATAAACGCGCTCAACACCATGTTGTCGCGTTTAAGGTGCGGAAAGGGGAAAGTGGTGCAGGATAACGATCTGATTGA
GCAATTTCTTGATGCCCTGTGGATCGAGCGCAATCTGGCGCAAAATACCGTGGATTCTTATCGCCTCGATCTGCGCTCAC
TCGGTGACTGGCTGGCGCACCAGCAGCTGTCGCTGTTGAACGTTGAGGTGTTCAATCTGCAGGAGTTCCTGGCGCAGCGC
CTGGAGGGTGGCTATAAAGCCACCAGTTCTGCGCGCCTGCTTAGCGCGATGCGCCGTCTGTTTCAGTACCTCTATCGGGA
AAAGCTGCGTGAAGACGACCCCAGCGCGCTGCTTTCCTCACCCAAGCTGCCGCAGCGGCTGCCGAAGGATCTGTCGGAAG
CCCAGGTAGAAAGATTATTACAGGCACCATGCCTGGAACAGCCGATTGAACTGCGCGATAAGGCGATGCTGGAACTGTTG
TACGCCACCGGTCTGCGCGTGACGGAACTGGTCGGTCTGACCCTGAGTGATATCAGTCTGCGTCAGGGGGTGGTACGGGT
GATCGGTAAAGGAAATAAAGAACGCCTGGTGCCGATGGGCGAAGAGGCGGTGCACTGGATCGAGCAGTATATTGAGTATG
GCCGCCCGTGGCTGCTTAATGGACAGACGATTGACGTGTTGTTCCCCAGTAACCGCGCGAAACAAATGACGCGTCAAACC
TTCTGGCATCGCATCAAACATTACGCCACACTGGCGGGTATCGACAGCGACAAACTGTCACCCCACGTTCTGCGCCATGC
TTTTGCAACCCATTTGTTGAACCACGGGGCAGATTTACGTGTCGTACAGATGTTATTAGGTCACAGCGATTTATCAACGA
CACAGATTTATACCCATGTAGCGACAGAGCGTCTGCGACAGCTGCATCAGCAGCACCATCCACGCGCCTGA

Protein sequence :
MINALNTMLSRLRCGKGKVVQDNDLIEQFLDALWIERNLAQNTVDSYRLDLRSLGDWLAHQQLSLLNVEVFNLQEFLAQR
LEGGYKATSSARLLSAMRRLFQYLYREKLREDDPSALLSSPKLPQRLPKDLSEAQVERLLQAPCLEQPIELRDKAMLELL
YATGLRVTELVGLTLSDISLRQGVVRVIGKGNKERLVPMGEEAVHWIEQYIEYGRPWLLNGQTIDVLFPSNRAKQMTRQT
FWHRIKHYATLAGIDSDKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-58 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-58 56