Gene Information

Name : pagC (EPYR_03156)
Accession : YP_005803907.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Virulence
Product : Virulence membrane protein pagC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3214988 - 3215545 bp
Length : 558 bp
Strand : +
Note : Virulence-related outer membrane protein,Enterobacterial Ail/Lom protein

DNA sequence : 
ATGAAAGTAAAAGTTATGGCAGTGATTTTGGCCTTAAGCGCTCTGCAAGCCAGCTTGCTGGTGCATGCAGACAGTCATGC
TCTATCGATCGGCTATGCGCAAAGCCGGGTGCAGGATTTTAAAAATCTGCGGGGTGTTAACCTCAAGTATCGCTATGAGC
CGAATTCTTTACTTGGCGTCATCACGTCATTCAGCTATATGTCTGCTGGAGGACACGAGTTTGATTCGCTCAGCTGGGGG
GACACATATTACGACGACCGTATAAAAGTAAAATACTATTCGTTACTTATCGGTCCGTCTTATCGAATTAACAAATATGT
TTCACTTTATGCCGTTAGTGGTTTAGGTAGCAGTAAATTAGATCTCACACAGAACTACCGCCATACTAATTATACCTATA
CTGAACACACGGCTAGCAACACGACTTCATTTGCTTATGGTGCAGGTGTACAGATTAACCCTCTGAAAAATATTGCCATC
GATATTAGCTATGAAAAAAGTAAAATCAATGCAAAAAAAATCAATGGCTTTAGTATGGGCATTGGCTATCATTTCTAA

Protein sequence : 
MKVKVMAVILALSALQASLLVHADSHALSIGYAQSRVQDFKNLRGVNLKYRYEPNSLLGVITSFSYMSAGGHEFDSLSWG
DTYYDDRIKVKYYSLLIGPSYRINKYVSLYAVSGLGSSKLDLTQNYRHTNYTYTEHTASNTTSFAYGAGVQINPLKNIAI
DISYEKSKINAKKINGFSMGIGYHF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pagC YP_216243.1 PhoP regulated protein: reduced macrophage survival Not tested SPI-11 Protein 6e-33 47
Z4321 NP_289546.1 PagC-like membrane protein Not tested OI-122 Protein 4e-28 42
unnamed ADD91732.1 putative PagC-like membrane protein Not tested PAI-I AL862 Protein 2e-28 42
Z4321 AAQ19134.1 putative PagC-like membrane protein Not tested PAI I CL3 Protein 1e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pagC YP_005803907.1 Virulence membrane protein pagC VFG0442 Protein 4e-32 44