Gene Information

Name : EPYR_03047 (EPYR_03047)
Accession : YP_005803798.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Unknown
Product : transposase insO for insertion sequence element IS911B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3089962 - 3090801 bp
Length : 840 bp
Strand : -
Note : Polynucleotidyl transferase, Ribonuclease H fold

DNA sequence :
GTGGCCACTCTCTGCCATGTGTTTGGGGTTCATCGCAGCAGCTATAAATACTGGAAAAATCGTCCTGAAAAACCAGACGG
CAGACGGGCTGTGTTACGAAGTCAGGTACTTGAGCTACATGGCATCAGCCACGGTTCGGCCGGAGCAAGAAGCATCGCCA
CAATGGCAACCCAGAGAGGCTATCAGATGGGGCGCTGGCTTGCTGGCCGGCTCATGAAAGAACTGGGGCTGGTCAGTCGC
CAGCAGCCGACTCACCGGTATAAGCGTGGCGGTCATGAACACGTTGCTATCCCGAATCACCTTGAGCGACAGTTCGCCGT
AACAGAGCCAAACCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACAGGCAAACGCTGGGTATACCTCGCTGTTGTTC
TCGACCTGTTTGCAAGAAAGCCAGTGGGCTGGGCAATGTCGTTCTCGCCGGACAGTAGACTCACCATGAAAGCACTGGAA
ATGGCATGGGAAACTCGCGGTAAGCCCGCAGGAGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTT
CCGGCAGTTACTGTGGCGCTACCGGATCAGGCAGAGTATGAGCCGGCGTGGAAACTGTTGGGATAATAGCCCAATGGAAC
GCTTCTTTCGGAGTCTGAAAAACGAATGGGTGCCAGTGACAGGTTACGTAAGCTTCAGCGATGCGACTCACGCCATAACG
GACTACATCGTTGGATATTACAGCGCACTCAGGCCGCACGAATATAATGGTGGGTTGCCACCAAACGAATCAGAAAATCG
ATACTGGAAAAACTCTAACGCGGTGGCCAGTTTTTGTTGA

Protein sequence :
MATLCHVFGVHRSSYKYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATQRGYQMGRWLAGRLMKELGLVSR
QQPTHRYKRGGHEHVAIPNHLERQFAVTEPNQVWCGDVTYIWTGKRWVYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPAGVMFHSDQGSHYTSRQFRQLLWRYRIRQSMSRRGNCWDNSPMERFFRSLKNEWVPVTGYVSFSDATHAIT
DYIVGYYSALRPHEYNGGLPPNESENRYWKNSNAVASFC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 4e-98 90
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 4e-98 90
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-93 66
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-93 66
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-93 66
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-93 66
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-93 66
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-93 66
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-93 66
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-93 66
unnamed AAC31485.1 L0006 Not tested LEE Protein 1e-65 63
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 2e-65 63
unnamed CAI43898.1 putative transposase Not tested LEE Protein 3e-66 63
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 3e-66 63
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 2e-69 63
Z5089 NP_290241.1 transposase Not tested LEE Protein 8e-67 62
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 6e-67 62
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 2e-65 55
tnpB CAB61574.1 transposase B Not tested HPI Protein 7e-39 41
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 6e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EPYR_03047 YP_005803798.1 transposase insO for insertion sequence element IS911B VFG1484 Protein 2e-98 90
EPYR_03047 YP_005803798.1 transposase insO for insertion sequence element IS911B VFG1122 Protein 8e-94 66
EPYR_03047 YP_005803798.1 transposase insO for insertion sequence element IS911B VFG0785 Protein 3e-67 62