Gene Information

Name : thiC (EPYR_00272)
Accession : YP_005801023.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Unknown
Product : protein thiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 310578 - 312512 bp
Length : 1935 bp
Strand : -
Note : -

DNA sequence :
ATGTCTATCGTTGAAAAAAAAACCACCCGCCGTGAACAACGCGCCCAGGCGCAGAAGTTTATCGACTCCTTACAAGGTAG
CGCTTTTCCCAACTCAAAACGCATCTGGCTCACCGGATCGCAGCCCGATATTCGTGTACCGATGCGCGAAATCCAGCTTA
GCCCCACCGTAACAGGTGGCCGCAAAGATAATCCAACGCTGGTCGAAAATGAGCCGGTGCCGGTCTATGACACCGCCGGT
CCCTATGGTGACCCGGAAGCCAGCATTGATGTTCATGCCGGACTGGCCAAACTGCGTCGTGACTGGATTGTCAAACGCAA
TGATACCGAACAGATCGCCGAACTGAGTTCCGCCTATACCCAGGAACGCCTGGCCGATGAGGGGCTGGATCACCTGCGTT
TCGACAACCTTCCGCGCCCACGCAGCGCCCGTGCCGGGCGCTGCGTGACTCAGATGCACTACGCGCGTCTTGGGGTGATT
ACGCCGGAAATGGAATTTATTGCCATCCGCGAGAATATGGGGCGCGAGCGCATTCGCGGCGAAGTGCTGTTACAACAGCA
CCCGGGTAACAGCTTTGGTGCCAGCCTGCCGGAAAATATTACCCCCGAATTTGTCCGCCAGGAAGTCGCAGAAGGACGCG
CCATTATTCCCGCCAATATCAACCATCCGGAATCGGAACCGATGATTATTGGCCGTAACTTCCTGGTGAAAATCAATGCG
AATATCGGCAACTCGGCGGTCAGCTCCTCTATCGAAGAAGAGGTGGAGAAGCTTGTATGGTCGGCGCGCTGGGGCGCAGA
TACGGTGATGGACCTGTCAACCGGGCGTTATATTCATGAAACACGCGAGTGGATCCTGCGTAACAGCCCGGTTCCCATTG
GCACAGTACCAATCTATCAGGCACTGGAGAAAGTGAACGGCATAGCAGAGGATCTCAACTGGGAGATCTTCCGCGATACC
TTGCTGGAACAGGCTGAACAGGGCGTCGACTACTTCACCATCCATGCCGGCGTGCTGCTGCGCTATGTGCCGATGACCGC
CAAACGGCTGACCGGCATTGTTTCACGCGGAGGATCGATCATGGCGAAATGGTGTCTGTCGCATCATCAGGAAAGTTTTC
TCTATCTGCATTTCCGTGAAATATGCGAAATCTGCGCCGCTTACGACGTATCCCTGTCGCTCGGTGACGGCCTGCGTCCA
GGCTCGATTCAGGACGCTAACGATGAGGCCCAGTTCGCCGAGCTGCGCACGCTGGGTGAACTGACCAAAATCGCCTGGGA
ATACGATGTGCAGGTGATGATTGAAGGCCCCGGTCATGTACCCATGCAGATGATCCGCACCAATATGACGGAACAGCTGC
AACACTGCCACGAAGCGCCCTTCTATACGCTCGGCCCGCTGACCACTGATATCGCACCGGGTTACGACCATTTTACCTCC
GGAATTGGTGCCGCGATGATTGGCTGGTTTGGCTGCGCCATGCTGTGCTACGTCACACCCAAAGAACATCTTGGCCTGCC
GAACAAAGAGGATGTTAAGCAGGGACTGATTACCTACAAAATCGCTGCCCACGCCGCCGACCTGGCCAAAGGCCATCCCG
GCGCGCAGATCCGCGACAACGCCATGTCAAAAGCGCGCTTTGAATTCCGCTGGGAAGACCAGTTTAATCTTGCCCTTGAC
CCGCATACTGCCCGCGCTTATCACGATGAAACCCTGCCCCAGGAATCGGGCAAGGTGGCGCACTTCTGTTCGATGTGCGG
ACCGAAGTTCTGTTCAATGAAAATTACCCAGGAAGTGCGGGAATACGCCGCACGACAGGAAGCGGAAGCAAAGCCGGTCG
AGATTGGCATGGCACAGATGTCGCATGAATTCCGCCGTCGGGGAGGCGAGCTTTATCACCGCGCCGATAGCCTGAAGCCG
GAGGAAAAAGTATGA

Protein sequence :
MSIVEKKTTRREQRAQAQKFIDSLQGSAFPNSKRIWLTGSQPDIRVPMREIQLSPTVTGGRKDNPTLVENEPVPVYDTAG
PYGDPEASIDVHAGLAKLRRDWIVKRNDTEQIAELSSAYTQERLADEGLDHLRFDNLPRPRSARAGRCVTQMHYARLGVI
TPEMEFIAIRENMGRERIRGEVLLQQHPGNSFGASLPENITPEFVRQEVAEGRAIIPANINHPESEPMIIGRNFLVKINA
NIGNSAVSSSIEEEVEKLVWSARWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGIAEDLNWEIFRDT
LLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQESFLYLHFREICEICAAYDVSLSLGDGLRP
GSIQDANDEAQFAELRTLGELTKIAWEYDVQVMIEGPGHVPMQMIRTNMTEQLQHCHEAPFYTLGPLTTDIAPGYDHFTS
GIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALD
PHTARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVREYAARQEAEAKPVEIGMAQMSHEFRRRGGELYHRADSLKP
EEKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 72
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 72
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 70