|
Name : ribD (EPYR_02872) Accession : YP_005803623.1 Strain : Erwinia pyrifoliae DSM 12163 Genome accession: NC_017390 Putative virulence/resistance : Unknown Product : diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase Function : - COG functional category : - COG ID : - EC number : 3.5.4.26 Position : 2922932 - 2924035 bp Length : 1104 bp Strand : - Note : Riboflavin biosynthesis protein ribD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase)] DNA sequence : ATGCGCGATGAAATTTATATGGCCCGGGCGCTGGAACTGGCGCGCCGTGGCCGTTTTACCACCACGCCGAATCCTAATGT AGGATGCGTGCTGGTGCGTGATGGCCAGATCGTCGGTGAAGGCTACCATATGCTCGCCGGCGAGCCGCACGCGGAAGTAC ACGCGCTACGCATGGCTGGTGAGAAATCGCTCGGGGCTACCGCCTATGTCACGCTGGAGCCGTGTAGCCATCACGGGCGT ACGCCGCCGTGCTGTGAGGCGCTGATTGCGGCTGGCATTAAGCGGGTCGTTACCGCGATGCAGGATCCGAACCCGCAGGT AGCCGGGCGCGGGCTATATCGTTTGCAGCAGGCAGGGATTGAAGTCAGCCACGGGCTGATGATGCAGGAAGCGGAAGCGC TGAATCGTGGCTTTCTCAAACGCATGCGCACCGGTTTCCCTTGGGTACAGCTTAAGCTCGGTGCCTCCCTGGATGGGCGC ACGGCGATGGCCAGCGGGGAAAGCCAGTGGATCACCTCTCCTGAAGCAAGACGCGATGTGCAAAGACTGCGCGCGCAAAG CTCGGCTATCCTCAGCACCAGCGCCACCGTGCTGGCAGATAATCCGGCGCTGACCGTTCGTCACGATGAACTGGATAGCG CCAGTCTGGCGGACTACCCGGTCGATTTGCTGCGCCAGCCGGTACGCGTCATCGTTGACGGTCAGAATCGCGTGACTCCA GAGTATCGGCTAGTTGCCCAGCCGGGGGAGACCTGGCTGGCACGCACCTCCGGCGATCGGCAGCAGTGGCCGGAAAACGT TAGCCAGCTGATCGTACCGCTCTATCAGAATCGCCTCGATCTGGTCTCATTACTGATGCTGCTGGGCAAAAAACAGATTA ACAGCGTTTGGGTGGAAGCCGGAGCGCAATTTGCCGGCGCATTATTACAGGCAGGCGTCGTCGATGAACTGATCGTCTAT CTGGCTCCTAAATTACTTGGCGATGCCGGGCGTGGCCTGTGTCAGCTGCCGGGGCTGGAAACGCTGGCCGCTGCACCTGC CTTTACCTTTAGTGATATTCGTCAGGTAGGGCCTGATATCAGGCTCACGTTGACCCCGTCATAA Protein sequence : MRDEIYMARALELARRGRFTTTPNPNVGCVLVRDGQIVGEGYHMLAGEPHAEVHALRMAGEKSLGATAYVTLEPCSHHGR TPPCCEALIAAGIKRVVTAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMQEAEALNRGFLKRMRTGFPWVQLKLGASLDGR TAMASGESQWITSPEARRDVQRLRAQSSAILSTSATVLADNPALTVRHDELDSASLADYPVDLLRQPVRVIVDGQNRVTP EYRLVAQPGETWLARTSGDRQQWPENVSQLIVPLYQNRLDLVSLLMLLGKKQINSVWVEAGAQFAGALLQAGVVDELIVY LAPKLLGDAGRGLCQLPGLETLAAAPAFTFSDIRQVGPDIRLTLTPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 4e-59 | 48 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 4e-59 | 48 |
