Gene Information

Name : invA (EPYR_02152)
Accession : YP_005802903.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Virulence
Product : type III secretion apparatus InvA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2247444 - 2249525 bp
Length : 2082 bp
Strand : -
Note : type III secretion system protein InvA, FHIPEP family, HrcV/FlhA family

DNA sequence :
GTGAATATGTTAAGTAATTTTATTGGGCAAATGCGAACACGTCCTGAGCTGATCGTCTTGCTGATGATGATTATGGTCGT
CGTTATGTTGATAATTCCACTGCCAACATACTTGGTCGATTTTTTTATCGCACTAAATTTGACAATGGCATTATTGATAT
TCATCGGCTCTTTCTATATAAACAGAATTTTGGATTTTTCGACGTTCCCATCGATGATTATGATCAGTACCATATTTCGT
CTGGCTATTTCTATCAGTACTAGCCGCTTAGTTCTAACCGACGCGGATGCTGGTAAAATTATTTCGAGTTTCGGTGAATT
CGTTATTGCAGAAAGTCTTGTAGTTGGGATGGTTATTTTCTTTATCGTCACTGTAGTGCAGTTTATCGTCATTACAAAAG
GCTCTGAGCGTATTGCCGAGGTTGCAGCCCGCTTTTCTTTAGATGCCATGCCGGGTAAGCAAATGAGTATTGATGCTGAC
CTTAAAGCAGGCGTGATCGATGAAAAAGAGGTCAGACGGCGCCGTAGCGATCTGGAGGCAGAAAGTCAGCTTTATGGTGC
TCTGGATGGCGCAATGAAGTTTATCAAAGGCGATGCTATCGCCGGGATAATTATTATTTTAGTTAACCTGCTTGGAGGAC
TTGCTATTGGTGTAGTGCAGAAAGGGATGAATATATCACATGCTTTGTCCATATATGCATTGTTGACTATTGGTGAGGCT
TTAGTTGCCCAAATCCCCGCATTACTGATCTCAATAAGCGGTGGATTGATTGTAACGCGCGTAAATAATAATGAAAATAC
AAATTTAGGTGCTAAGATACTGCAAGATCTTTTTCTCAATAAGTCAACCTTAGTGATAACAGCAATATTAGCCGTTACAT
TAGGCTTATTGCCCGGATTCCCATTAATTGTATTTCTTTTACTGGCTATTATTCTACTTGGGGTCTTTTATAAGGATAAA
TACAATAAAAATAAGAATAACAGTCTTGATCCAGATGACTCAGAGGTTGCAGAACAGTCCACTGTCAAAAGTAAGCCTGT
AGTTATAGATGGAGAATACATTCCTGAGACTGTTCCGCTTATTGTGAGTTCCTGGAATGGATATGAAAAATATTTTGCCA
AGAATAATTTTTCTTCTTTACTGAAACGCCATTTTTTTATCGAGTATGGCGTTCGTCTGCCTGATTTGATTATGAATTAT
GACCAGCATGTTGAACAGGGGAAGTTGACTGTTGCTATCAATGAAATACAGGTCGCAAGTTATGATTTTTTCCCTGAAAT
GCACAAAGTTCTTTTCAGAGGAGATGAGTTAAAATTAATAGATGACAACGTAAAGGTGGTAAATACTTCCCATGGAAAAA
CCTACTGGATACCTGAGGAAAGACATGAAACAGCTTTGAAACTCGGATTTTACTCAAGGGATGCAGTTAACGAATTTTAC
TCCTGTATATCTACGTTACTCGTTCATAATATTTCTGAGTTTTTTGGTATTCAGGAAGCCAAAACGTTGCTTGACGACCT
TGAGAAGAAATATCCTGACTTGCTTAAAGAGTGCTACCGAAATAATACAGTTCAACGAATCACTGAAGTGTTTCAACGGT
TACTCAAGGAGCGTATTTCAATCAGAAATATGCGTTTGATTCTCGAGGCTTTAGTCCAGTGGGCTCCTAAGGAGAAAGAT
CCAATTATGCTGGTTGAACATGTACGTGGAGTTTTAGCACGCTATATTTCAAGCCGATTCTCAGCTGAAGGTCGTATCAG
AACTGTGGTGATGTCGCATGATATGGAGAGTATTATCCGCGACGGAATCCGCCAGACTTCTGGGGGTACATTCGTCAATC
TGCCGCCATTGGAAACAGAAAATATAATAAAATCTCTCGAAATCTGCTTGCAAAACAATAGGGTAAATGCAAGAGACATT
ATTCTAATGGTATCTATGGATATCAGACGCTTTGCTAAAACCATCATCGAAGGGACTTATTCAGAATTAGATGTACTCTC
TTTTAGTGAGGTCTCTGCCGGCGTAGAAATTGACGTCATTGGTTCATTAGAAAACTATAGTGAGGCTGTAAATGAAATAT
GA

Protein sequence :
MNMLSNFIGQMRTRPELIVLLMMIMVVVMLIIPLPTYLVDFFIALNLTMALLIFIGSFYINRILDFSTFPSMIMISTIFR
LAISISTSRLVLTDADAGKIISSFGEFVIAESLVVGMVIFFIVTVVQFIVITKGSERIAEVAARFSLDAMPGKQMSIDAD
LKAGVIDEKEVRRRRSDLEAESQLYGALDGAMKFIKGDAIAGIIIILVNLLGGLAIGVVQKGMNISHALSIYALLTIGEA
LVAQIPALLISISGGLIVTRVNNNENTNLGAKILQDLFLNKSTLVITAILAVTLGLLPGFPLIVFLLLAIILLGVFYKDK
YNKNKNNSLDPDDSEVAEQSTVKSKPVVIDGEYIPETVPLIVSSWNGYEKYFAKNNFSSLLKRHFFIEYGVRLPDLIMNY
DQHVEQGKLTVAINEIQVASYDFFPEMHKVLFRGDELKLIDDNVKVVNTSHGKTYWIPEERHETALKLGFYSRDAVNEFY
SCISTLLVHNISEFFGIQEAKTLLDDLEKKYPDLLKECYRNNTVQRITEVFQRLLKERISIRNMRLILEALVQWAPKEKD
PIMLVEHVRGVLARYISSRFSAEGRIRTVVMSHDMESIIRDGIRQTSGGTFVNLPPLETENIIKSLEICLQNNRVNARDI
ILMVSMDIRRFAKTIIEGTYSELDVLSFSEVSAGVEIDVIGSLENYSEAVNEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaV AAS66840.1 YsaV Not tested SSR-1 Protein 0.0 64
invA YP_217815.1 invasion protein Virulence SPI-1 Protein 1e-142 51
invA NP_457290.1 possible secretory protein (associated with virulence) Virulence SPI-1 Protein 1e-142 51
invA NP_806499.1 virulence-associated secretory protein Virulence SPI-1 Protein 1e-142 51
invA NP_461817.1 needle complex export protein Virulence SPI-1 Protein 1e-142 51
ECs3731 NP_311758.1 EivA Not tested LIM Protein 3e-141 50
invA AAS66860.1 InvA Not tested SSR-2 Protein 4e-136 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
invA YP_005802903.1 type III secretion apparatus InvA VFG1780 Protein 2e-155 54
invA YP_005802903.1 type III secretion apparatus InvA VFG0557 Protein 5e-143 51
invA YP_005802903.1 type III secretion apparatus InvA VFG1006 Protein 1e-127 50
invA YP_005802903.1 type III secretion apparatus InvA VFG0064 Protein 4e-104 41