Gene Information

Name : sitA (EPYR_01591)
Accession : YP_005802342.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Virulence
Product : iron ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1692643 - 1693554 bp
Length : 912 bp
Strand : -
Note : Periplasmic solute binding protein, TC 3.A.1.15.7 SitA (Salmonella iron transporter: fur regulated) (Iron transport protein, periplasmic-binding protein)

DNA sequence : 
ATGTCATATCTGTATCGATTAAAAGGATGGTTATGTGGCGTGGCGCTCGCCGCGCTGCCGCTGGCACCCGCGCTGGCACA
GGATAAGTTTAAGGTGATCACCACCTTTACCATTATTGCCGACATGGCACAGAACGTCGCCGGAGATGCGGCAGAAGTCG
CGTCAATAACCAAACCGGGCGCCGAGATCCACGAATATCAGCCAACACCCGGTGATATTAAGCGCGCTCAGGGTGCGCAG
CTGATCCTGGCCAACGGGCTTAACCTCGAATTATGGTTTAAACGCTTTTACCAACATCTGTCCGGGGTGCCGGAAGTGGT
GGTTTCCGACGGGATTATTCCGCTGGGTATCAGCGAAGGCCCCTATAACGGTAAACCTAATCCCCATGCGTGGATGTCGC
CCAACAATGCGCTGATCTACGTGGATAATATCCGCGATGCGCTGGTGAAATACGATCCTGTCCATGCCGACATCTATCGC
AAAAATGCGGCTGCCTATAAAGAAAAAATTAGCGCGACCATCGCCCCGGTGCAGCAGGCGCTGGCACAGCTACCCGCAGA
CAAACGCTGGCTGGTAACCAGTGAAGGTGCATTTTCATATCTGACGCGTGATTTTGGTTTGCAGGAACTGTATCTGTGGC
CAATCAATGCCGATCAGCAGGGAACGCCTCAACAGGTGCGCAAAGTCATCGACAAAGTGAAACAATATCAAATTCCGGCC
GTATTCAGCGAAAGTACCGTATCCGATAAAGCCGCCCGTCAGGTTGCGCGTGAGACCGGCAGCCACTACGGCGGCATACT
CTATGTTGATTCGCTCAGCACCGCAGATGGCCCGGTTCCGACCTATCTCGACCTGCTGCGCGTCACCAGTGAAACTCTTG
TCAACGGTATTCATCAGGGGTTGGCTAAATGA

Protein sequence : 
MSYLYRLKGWLCGVALAALPLAPALAQDKFKVITTFTIIADMAQNVAGDAAEVASITKPGAEIHEYQPTPGDIKRAQGAQ
LILANGLNLELWFKRFYQHLSGVPEVVVSDGIIPLGISEGPYNGKPNPHAWMSPNNALIYVDNIRDALVKYDPVHADIYR
KNAAAYKEKISATIAPVQQALAQLPADKRWLVTSEGAFSYLTRDFGLQELYLWPINADQQGTPQQVRKVIDKVKQYQIPA
VFSESTVSDKAARQVARETGSHYGGILYVDSLSTADGPVPTYLDLLRVTSETLVNGIHQGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-104 77
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-104 77
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-104 77
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-104 77
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 9e-105 77

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_005802342.1 iron ABC transporter substrate-binding protein BAC0349 Protein 6e-105 77
sitA YP_005802342.1 iron ABC transporter substrate-binding protein BAC0439 Protein 9e-83 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_005802342.1 iron ABC transporter substrate-binding protein VFG0525 Protein 5e-105 77