Gene Information

Name : sitB (EPYR_01590)
Accession : YP_005802341.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 1691843 - 1692646 bp
Length : 804 bp
Strand : -
Note : ABC transporter, ATP-binding protein, TC 3.A.1.15.7 SitB (Salmonella iron transporter: fur regulated)

DNA sequence : 
ATGAACATTAGCGCCGCACGTCAGAACGGCATTGAGGTTGCTAACCTGACGGTCACCTATCGCAACGGGCACACTGCCCT
GCGCGCCGCCTCATTACAGATCCCCACCGCCAGCATTGCTGCGCTGCTCGGGATCAACGGTTCCGGGAAATCGACGCTGT
TTAAAGCCATTATGGGCTTTGTCCCCCCCTCGTCCGGAACGATTACTCTGCTGGATCAACCGTGGCACAGGGCGCTAAAA
AACAACCTGGTGTCATATGTTCCGCAGTCCGAGGATGTCGACTGGTCGTTTCCGGTACTGGTCGAGGACGTGGTAATGAT
GGGTCGTTACGGGCATATGGGCATGCTGCGCATTGCCCGCGCCGAAGACAAACGCCTGGTCGCTGCGGCTCTGGAGCGAG
TTGGCATGACAGACTTCCGCCGTCGTCAAATCGGTGAACTGTCCGGCGGGCAGAAAAAACGCGTCTTTCTCGCTCGCGCT
ATCGCACAACGTGGTCAGGTGATCCTGCTGGATGAACCATTTACCGGCGTCGACGTCAATACCGAGCGCCAGATCGTCAA
CCTGCTGCATGAGCTGCGCGACGAAGGGCGCACCATGCTGGTCTCTACCCACAACCTGGCTTCCGTCACTGACTATTGTG
ACCACACGGTTATCGTCAAAGGTACGGTGCTGGCCTGCGGCCCCACTGCCACCACCTTTACCCGTAGCAACCTGGAGAAT
GCCTTTAGCGGTGAGTTGCGCGATCTGGTGTTTAACGACGCTGACCCTCTGCCGGCGCTCTCACTCGTTCAGGGGGACCG
CTGA

Protein sequence : 
MNISAARQNGIEVANLTVTYRNGHTALRAASLQIPTASIAALLGINGSGKSTLFKAIMGFVPPSSGTITLLDQPWHRALK
NNLVSYVPQSEDVDWSFPVLVEDVVMMGRYGHMGMLRIARAEDKRLVAAALERVGMTDFRRRQIGELSGGQKKRVFLARA
IAQRGQVILLDEPFTGVDVNTERQIVNLLHELRDEGRTMLVSTHNLASVTDYCDHTVIVKGTVLACGPTATTFTRSNLEN
AFSGELRDLVFNDADPLPALSLVQGDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 9e-84 71
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 9e-84 71
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-84 71
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-84 71
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 8e-85 71

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_005802341.1 iron ABC transporter ATP-binding protein BAC0350 Protein 5e-85 71
sitB YP_005802341.1 iron ABC transporter ATP-binding protein BAC0440 Protein 2e-74 62
sitB YP_005802341.1 iron ABC transporter ATP-binding protein BAC0400 Protein 5e-47 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_005802341.1 iron ABC transporter ATP-binding protein VFG0526 Protein 5e-85 71