Name : intB (EPYR_01562) Accession : YP_005802313.1 Strain : Erwinia pyrifoliae DSM 12163 Genome accession: NC_017390 Putative virulence/resistance : Unknown Product : protein intB Function : - COG functional category : - COG ID : - EC number : - Position : 1670328 - 1671545 bp Length : 1218 bp Strand : - Note : DNA breaking-rejoining enzyme, catalytic core,Phage integrase family DNA sequence : GTGGCGCTTACTGATATAAAAATAAGAAATACAAAGCCTTCCGGGAAAGCCGTTAAGCTCACTGACGGCTTCGGTATGTA TCTGCTCATACACCCCAACGGCTCAAAATACTGGCGCATGCAGTACCGTTTTGGCGGTAAGCAAAAAACTCTGGCACTTG GCGTGTATCCTGCCGTCTCTTTATCTGATGCAAGGCAGCGCCGTGACGAAGCAAAAAAGCTGCTGGCGAAAGGAACCGAC CCTGTTGTGAAGAAGCAGGACGACAAACGGGAAAACAGCGGCACTTTTTCGTTTGAATCGGTCGCCAGACAATGGCATGC GGGCAATAAAAAGTGGTCAGAAGAGTACAAAGGGAAAATTCTGCGCACGCTGGAAACCTATCTTTTTCCGGTAATCGGCA ATCGCCATATCGCAGAACTGAAAACCCGCGACCTGCTGGTGCCGATAAAAGCGGTTGAGGATAAGGGTTTTAATGAAGTG GCTATGCGGCTGCAACAGCGCACCACCGCCATTATGCGTTACGCCGTTCTACAGGGTATTCTTGATTATAATCCTGCTCA GGAAATGTCAGGTGCGATTACCACAGGTAAACGCGCTCACCGTCCCGCCCTGCCCTTTGAACGATATCACGAGTTTTTAG AACGCATTGACAGTTACCGTAAAAGATTACTTACTCGGCTGGCAGTGAAACTGACCCTGCTGACCTTTATTCGTTCCAGC GAACTCCGTTTTGCACGATGGTCAGAAATTGATTTTAAAAAATCGCTCTGGACGATACCTGGTGAGCGCGAAGCACTGCC GGGCATAAAAAACGCACATCGCGGAGCCAAAATGAAAACCCCGCACCTAGTTCCACTCAGCAGGCAGGCCATTGCCATTC TGAGAGAAATACAGGAAATCAGTGGCGACCATAACTTCATCTTTATCGGCGACCACTATGCCGACAAACCCATGAGTGAA AATACGGTCAACAAAGCACTACGCACTATGGGCTACGACACGCAGAAAGACGTCTGCGGTCACGGTTTTCGCACAATGGC ATGCAGTTCTCTTATTGAGTCGGGTAAATGGTCTAAGGATGCCGTTGAACGCCAGATGAGCCATCAGGAACTCAATAATG TTCGCGCAGCCTATACCCACCAGGCCGAACATCTGGATGAGCGCAGGCTTATGCTGCAATGGTGGGCTGATTTTCTGGAT GCTAACCGGGAAGGTTGA Protein sequence : MALTDIKIRNTKPSGKAVKLTDGFGMYLLIHPNGSKYWRMQYRFGGKQKTLALGVYPAVSLSDARQRRDEAKKLLAKGTD PVVKKQDDKRENSGTFSFESVARQWHAGNKKWSEEYKGKILRTLETYLFPVIGNRHIAELKTRDLLVPIKAVEDKGFNEV AMRLQQRTTAIMRYAVLQGILDYNPAQEMSGAITTGKRAHRPALPFERYHEFLERIDSYRKRLLTRLAVKLTLLTFIRSS ELRFARWSEIDFKKSLWTIPGEREALPGIKNAHRGAKMKTPHLVPLSRQAIAILREIQEISGDHNFIFIGDHYADKPMSE NTVNKALRTMGYDTQKDVCGHGFRTMACSSLIESGKWSKDAVERQMSHQELNNVRAAYTHQAEHLDERRLMLQWWADFLD ANREG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
intB | CAD42017.1 | bacteriophage P4 integrase | Not tested | PAI II 536 | Protein | 3e-125 | 70 |
S4822 | NP_838459.1 | P4-type integrase | Not tested | SHI-1 | Protein | 2e-128 | 66 |
SF2964 | NP_708738.1 | P4-type integrase | Not tested | SHI-1 | Protein | 2e-128 | 66 |
int | AAK16198.1 | Int | Not tested | PAI-I AL862 | Protein | 8e-129 | 66 |
int | ADD91747.1 | P4 integrase | Not tested | PAI-I AL862 | Protein | 8e-129 | 66 |
ECO111_3718 | YP_003236059.1 | putative integrase | Not tested | LEE | Protein | 2e-126 | 65 |
ECUMN_3322 | YP_002414004.1 | integrase | Not tested | Not named | Protein | 2e-126 | 65 |
c5216 | NP_757064.1 | prophage P4 integrase | Not tested | PAI II CFT073 | Protein | 7e-129 | 65 |
c3556 | NP_755431.1 | prophage P4 integrase | Not tested | PAI I CFT073 | Protein | 5e-128 | 65 |
ORF_1 | AAZ04412.1 | phage integrase | Not tested | PAI I APEC-O1 | Protein | 1e-128 | 65 |
APECO1_3534 | YP_854214.1 | P4-like integrase | Not tested | PAI I APEC-O1 | Protein | 2e-128 | 65 |
int | AAL51028.1 | CP4-like integrase | Not tested | LEE | Protein | 1e-128 | 65 |
ECO103_3550 | YP_003223418.1 | integrase | Not tested | LEE | Protein | 2e-128 | 65 |
int-phe | AAL60261.1 | Int-phe | Not tested | LEE | Protein | 1e-128 | 65 |
ECO26_5300 | YP_003232178.1 | integrase | Not tested | LEE | Protein | 2e-128 | 65 |
int | AAT48697.1 | CP4-like integrase | Not tested | PAI I 4787 | Protein | 6e-128 | 65 |
Z4313 | NP_289539.1 | pathogenicity island integrase | Not tested | OI-122 | Protein | 9e-128 | 65 |
int | AAL51003.1 | CP4-like integrase | Not tested | LEE | Protein | 4e-128 | 65 |
intP4 | CAE85151.1 | CP4 integrase protein | Not tested | PAI V 536 | Protein | 2e-128 | 65 |
int-phe | AAL57571.1 | CP4-like integrase | Not tested | LEE | Protein | 1e-128 | 65 |
int | AAK00456.1 | Int | Not tested | SHI-1 | Protein | 2e-120 | 65 |
int | CAC81896.1 | integrase | Not tested | LEE II | Protein | 2e-120 | 65 |
SESS1296_03598 | AFO66301.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 1e-116 | 61 |
SESS1635_03816 | AFO66367.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 1e-116 | 61 |
STY4821 | NP_458899.1 | integrase | Not tested | SPI-10 | Protein | 7e-110 | 58 |
int | CAB59974.1 | integrase | Not tested | HPI | Protein | 2e-102 | 54 |
int | NP_458759.1 | bacteriophage integrase | Not tested | SPI-7 | Protein | 4e-103 | 54 |
int | NP_807963.1 | bacteriophage integrase | Not tested | SPI-7 | Protein | 4e-103 | 54 |
int | YP_002346908.1 | integrase | Not tested | HPI | Protein | 2e-102 | 53 |
y2393 | NP_669700.1 | prophage integrase | Not tested | HPI | Protein | 2e-102 | 53 |
int2 | NP_993013.1 | integrase | Not tested | HPI | Protein | 2e-102 | 53 |
int | CAA08754.1 | integrase | Not tested | HPI | Protein | 2e-102 | 53 |
int | CAA21384.1 | - | Not tested | HPI | Protein | 2e-102 | 53 |
APECO1_1051 | YP_853069.1 | phage integrase | Not tested | PAI IV APEC-O1 | Protein | 3e-72 | 52 |
unnamed | AAD17660.1 | unknown | Not tested | HPI | Protein | 8e-100 | 52 |
intB | AAD37509.1 | P4-like integrase | Not tested | PAI IV 536 | Protein | 4e-84 | 52 |
unnamed | ABR13507.1 | phage integrase | Not tested | PAGI-6 | Protein | 1e-88 | 50 |
aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 1e-77 | 43 |
int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 6e-77 | 43 |
int | CAC39282.1 | integrase | Not tested | LPA | Protein | 1e-77 | 43 |
intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 7e-76 | 42 |
ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 7e-76 | 42 |
int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 5e-76 | 42 |
int | ACU09430.1 | integrase | Not tested | LEE | Protein | 5e-76 | 42 |
int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 1e-75 | 42 |
S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 2e-75 | 42 |
SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 2e-75 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
intB | YP_005802313.1 | protein intB | VFG1536 | Protein | 2e-125 | 70 |
intB | YP_005802313.1 | protein intB | VFG0626 | Protein | 9e-129 | 66 |
intB | YP_005802313.1 | protein intB | VFG1693 | Protein | 2e-128 | 65 |
intB | YP_005802313.1 | protein intB | VFG0783 | Protein | 3e-76 | 42 |
intB | YP_005802313.1 | protein intB | VFG0598 | Protein | 8e-76 | 42 |